RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 HOXB8P17481 243 aaPredicted RBP23.49■■□□□ 1.35
SSNA1-202ENST00000459860 IGFBP6P24592 240 aaPredicted RBP23.49■■□□□ 1.35
SSNA1-202ENST00000459860 RPL13P26373 211 aaKnown RBP23.49■■□□□ 1.35
SSNA1-202ENST00000459860 PNPLA4P41247 253 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 TAF6P49848 677 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 WNT7BP56706 349 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 RBM10P98175 930 aaKnown RBP23.49■■□□□ 1.35
SSNA1-202ENST00000459860 CYP24A1Q07973 514 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 PSMD6Q15008 389 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 ANKRD54Q6NXT1 300 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 WDR49Q8IV35 697 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 SLC22A17Q8WUG5 538 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 TMEM174Q8WUU8 243 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 MTRRQ9UBK8 725 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 ITGA11Q9UKX5 1188 aa23.49■■□□□ 1.35
SSNA1-202ENST00000459860 ANO9A1A5B4 782 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 PIRO00625 290 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 DLATP10515 647 aaKnown RBP23.48■■□□□ 1.35
SSNA1-202ENST00000459860 ODC1P11926 461 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 EPCAMP16422 314 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 RPL17P18621 184 aaKnown RBP23.48■■□□□ 1.35
SSNA1-202ENST00000459860 TNNI1P19237 187 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 NR2F2P24468 414 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 PPP1R2P41236 205 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 DUOXA2Q1HG44 320 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 SV2CQ496J9 727 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 COBLL1Q53SF7 1204 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 VARS2Q5ST30 1063 aaKnown RBP23.48■■□□□ 1.35
SSNA1-202ENST00000459860 TMEM130Q8N3G9 435 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 CCDC127Q96BQ5 260 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 TSG101Q99816 390 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 MTMR12Q9C0I1 747 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 INTS13Q9NVM9 706 aa23.48■■□□□ 1.35
SSNA1-202ENST00000459860 MTCL1Q9Y4B5 1905 aaKnown RBP23.48■■□□□ 1.35
SSNA1-202ENST00000459860 SCN1AP35498 2009 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 M0QZQ0 153 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 PPEF2O14830 753 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 C1RP00736 705 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 ITGB3P05106 788 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 KRT19P08727 400 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 AARSP49588 968 aaKnown RBP eCLIP23.47■■□□□ 1.35
SSNA1-202ENST00000459860 LILRA4P59901 499 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 NFIL3Q16649 462 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 CEP135Q66GS9 1140 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 LMBRD2Q68DH5 695 aaPredicted RBP23.47■■□□□ 1.35
SSNA1-202ENST00000459860 ZNF280DQ6N043 979 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 USP37Q86T82 979 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 PALB2Q86YC2 1186 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 CGRRF1Q99675 332 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 DMAC2Q9NW81 257 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 MAN1B1Q9UKM7 699 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 BACE2Q9Y5Z0 518 aa23.47■■□□□ 1.35
SSNA1-202ENST00000459860 C5orf42Q9H799 3197 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 POLR2BP30876 1174 aaKnown RBP23.46■■□□□ 1.35
SSNA1-202ENST00000459860 PRCPP42785 496 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 TSC2P49815 1807 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 RBP5P82980 135 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 CES5AQ6NT32 575 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 CSGALNACT2Q8N6G5 542 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 C1orf127Q8N9H9 656 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 SMRP1Q8NCR6 262 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 MFSD14AQ96MC6 490 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 POP1Q99575 1024 aaKnown RBP23.46■■□□□ 1.35
SSNA1-202ENST00000459860 CLSTN3Q9BQT9 956 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 SFXN1Q9H9B4 322 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 MAN1C1Q9NR34 630 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 AGAP1Q9UPQ3 857 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 CDY1Q9Y6F8 540 aa23.46■■□□□ 1.35
SSNA1-202ENST00000459860 PSMA7O14818 248 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 YWHAHQ04917 246 aaPredicted RBP23.45■■□□□ 1.34
SSNA1-202ENST00000459860 EDRF1Q3B7T1 1238 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 ISM2Q6H9L7 571 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 RNF135Q8IUD6 432 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 LRRC52Q8N7C0 313 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 HDAC7Q8WUI4 952 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 SENP8Q96LD8 212 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 MUTYHQ9UIF7 546 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 DSEQ9UL01 958 aa23.45■■□□□ 1.34
SSNA1-202ENST00000459860 PTPRJQ12913 1337 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 TGM5O43548 720 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 TYMPP19971 482 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 OR1D2P34982 312 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 ITIH3Q06033 890 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 MYO1EQ12965 1108 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 CAMK4Q16566 473 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 CTXN3Q4LDR2 81 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 HFE2Q6ZVN8 426 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 METTL23Q86XA0 190 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 OR5B17Q8NGF7 314 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 OXCT2Q9BYC2 517 aaPredicted RBP23.44■■□□□ 1.34
SSNA1-202ENST00000459860 PLEKHA4Q9H4M7 779 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 LMBRD1Q9NUN5 540 aa23.44■■□□□ 1.34
SSNA1-202ENST00000459860 KPNA7A9QM74 516 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 BIN1O00499 593 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 MAPK13O15264 365 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 KRT13P13646 458 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 AP3M2P53677 418 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 BFSP1Q12934 665 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 ADAM9Q13443 819 aa23.43■■□□□ 1.34
SSNA1-202ENST00000459860 ZCWPW2Q504Y3 356 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms