RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MAFFQ9ULX9 164 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 TRAF3IP3Q9Y228 551 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 CDY1Q9Y6F8 540 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 TRIP11Q15643 1979 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 OAZ2O95190 189 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 ODC1P11926 461 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 TNNI1P19237 187 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 IGFBP6P24592 240 aaPredicted RBP17.44■□□□□ 0.38
CD28-203ENST00000458610 SSTR3P32745 418 aaPredicted RBP17.44■□□□□ 0.38
CD28-203ENST00000458610 AP3M2P53677 418 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 MRPL58Q14197 206 aaKnown RBP17.44■□□□□ 0.38
CD28-203ENST00000458610 PSMD6Q15008 389 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 SLC8B1Q6J4K2 584 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 CCDC149Q6ZUS6 474 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 GPR149Q86SP6 731 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 WDR49Q8IV35 697 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 EFCAB13Q8IY85 973 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 CSGALNACT2Q8N6G5 542 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 LRRC52Q8N7C0 313 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 ZNF461Q8TAF7 563 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 SENP8Q96LD8 212 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 APOL5Q9BWW9 433 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 RHOBTB2Q9BYZ6 727 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 KCTD10Q9H3F6 313 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 INTS13Q9NVM9 706 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 FRMD4BQ9Y2L6 1034 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 PCDHA5Q9Y5H7 936 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 ATG2AQ2TAZ0 1938 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 BRWD1Q9NSI6 2320 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 COL6A3P12111 3177 aa17.44■□□□□ 0.38
CD28-203ENST00000458610 OR6C75A6NL08 312 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 KPNA7A9QM74 516 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 TNFRSF10AO00220 468 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 GADD45BO75293 160 aaPredicted RBP17.43■□□□□ 0.38
CD28-203ENST00000458610 NR3C1P04150 777 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 HNRNPA1P09651 372 aaKnown RBP eCLIP17.43■□□□□ 0.38
CD28-203ENST00000458610 ELF1P32519 619 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 PPP1R2P41236 205 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 CYP24A1Q07973 514 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 MYO1EQ12965 1108 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 ZNF658Q5TYW1 1059 aaPredicted RBP17.43■□□□□ 0.38
CD28-203ENST00000458610 TPGS2Q68CL5 300 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 GJD3Q8N144 294 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 THEM5Q8N1Q8 247 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 C12orf76Q8N812 135 aaPredicted RBP17.43■□□□□ 0.38
CD28-203ENST00000458610 MFSD14AQ96MC6 490 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 PIDD1Q9HB75 910 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 DMAC2Q9NW81 257 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 FBXL5Q9UKA1 691 aa17.43■□□□□ 0.38
CD28-203ENST00000458610 CCDC195A0A1B0GUA6 201 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 ZMYND10O75800 440 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 ITGB3P05106 788 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 KRT19P08727 400 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 SPATA31D3P0C874 917 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 DLATP10515 647 aaKnown RBP17.42■□□□□ 0.38
CD28-203ENST00000458610 POLR2BP30876 1174 aaKnown RBP17.42■□□□□ 0.38
CD28-203ENST00000458610 STIM1Q13586 685 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 NFIL3Q16649 462 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 OVOS1Q6IE37 1185 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 TMC5Q6UXY8 1006 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 SPATA31D4Q6ZUB0 917 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 C1orf127Q8N9H9 656 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 SPATA20Q8TB22 786 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 CCDC127Q96BQ5 260 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 FBXW11Q9UKB1 542 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 NR2E1Q9Y466 385 aa17.42■□□□□ 0.38
CD28-203ENST00000458610 CYB561D2O14569 222 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 PPEF2O14830 753 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 MAPK13O15264 365 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 TBC1D4O60343 1298 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 HUS1O60921 280 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 XYLBO75191 536 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 CYP11A1P05108 521 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 ARPP19P56211 112 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 WNT7BP56706 349 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 ZP2Q05996 745 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 COBLL1Q53SF7 1204 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 PPM1LQ5SGD2 360 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 CLEC17AQ6ZS10 378 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 GBP4Q96PP9 640 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 CGRRF1Q99675 332 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 TSG101Q99816 390 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 PRKD2Q9BZL6 878 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 MTMR12Q9C0I1 747 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 MAPK8IP1Q9UQF2 711 aa17.41■□□□□ 0.38
CD28-203ENST00000458610 C19orf67A6NJJ6 358 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 SPTLC1O15269 473 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 ADAM12O43184 909 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 ABLIM3O94929 683 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 PAPLNO95428 1278 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 CPB1P15086 417 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 ATF2P15336 505 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 HOXA9P31269 272 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 ROR1Q01973 937 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 ADAM9Q13443 819 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 TRPC3Q13507 836 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 EDRF1Q3B7T1 1238 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
CD28-203ENST00000458610 RSPO2Q6UXX9 243 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms