RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 TATDN2Q93075 761 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 TIFAQ96CG3 184 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 HPDLQ96IR7 371 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 TMEM175Q9BSA9 504 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 ANP32EQ9BTT0 268 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 COLEC11Q9BWP8 271 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 GPR62Q9BZJ7 368 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 SLC28A3Q9HAS3 691 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 RAB20Q9NX57 234 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 IFNKQ9P0W0 207 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 NXF1Q9UBU9 619 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 ITGA11Q9UKX5 1188 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 R3HCC1Q9Y3T6 440 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 NUB1Q9Y5A7 615 aa9.35□□□□□ -0.91
CLTCL1-204ENST00000458188 EPOPA6NHQ4 379 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 HCRTO43612 131 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 STX10O60499 249 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 FGF18O76093 207 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 LAG3P18627 525 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 GTF2H1P32780 548 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 CA8P35219 290 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 RAP1GAPP47736 663 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 AP3M2P53677 418 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 LILRA4P59901 499 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 UBXN1Q04323 297 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 KCNMA1Q12791 1236 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 RAB30Q15771 203 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 WDR72Q3MJ13 1102 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 GJB7Q6PEY0 223 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 SCARA5Q6ZMJ2 495 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 RRAGAQ7L523 313 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 NT5DC4Q86YG4 428 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 GPIHBP1Q8IV16 184 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 ANKRD20A12PQ8NF67 263 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 AUTS2Q8WXX7 1259 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 CLP1Q92989 425 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 IGSF21Q96ID5 467 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 UROC1Q96N76 676 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 MMS19Q96T76 1030 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 VN1R3Q9BXE9 311 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 XYLT2Q9H1B5 865 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 APOBEC3GQ9HC16 384 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 AAASQ9NRG9 546 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 SPG21Q9NZD8 308 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 ADAM28Q9UKQ2 775 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 PCDHB12Q9Y5F1 795 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 PCDHGC5Q9Y5F6 944 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 SNX9Q9Y5X1 595 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 COL4A6Q14031 1691 aa9.34□□□□□ -0.91
CLTCL1-204ENST00000458188 LRRC10BA6NIK2 292 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 KPNA7A9QM74 516 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 C2CD2LO14523 706 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 CYB561D2O14569 222 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 GRM6O15303 877 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 TPM2P07951 284 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 WEE2P0C1S8 567 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 DNAJB1P25685 340 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 TAF6P49848 677 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 CDH8P55286 799 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 UBASH3AP57075 661 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 GPM6BQ13491 265 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 SGSM1Q2NKQ1 1148 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 ZNF699Q32M78 642 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 FAM171A1Q5VUB5 890 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 FUT10Q6P4F1 479 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 ARHGEF19Q8IW93 802 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 FBXL13Q8NEE6 735 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 LMO3Q8TAP4 145 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 GDPD5Q8WTR4 605 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 RSPH1Q8WYR4 309 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 KAT5Q92993 513 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 TMEM169Q96HH4 297 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 SENP8Q96LD8 212 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 TGS1Q96RS0 853 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 TSPAN18Q96SJ8 248 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 LSM14BQ9BX40 385 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 XPO4Q9C0E2 1151 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 INTS2Q9H0H0 1204 aaKnown RBP9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 ZNF576Q9H609 170 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 BDP1A6H8Y1 2624 aa9.33□□□□□ -0.92
CLTCL1-204ENST00000458188 TTC3P53804 2025 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 LGALS16A8MUM7 142 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 CALCAP01258 141 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 RPL17P18621 184 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 CD58P19256 250 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 PON1P27169 355 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 TKTP29401 623 aaKnown RBP9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 IRS1P35568 1242 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 ERVFC1P60507 584 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 ERVK-21P61565 698 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 KRT17Q04695 432 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 ENPEPQ07075 957 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 MYO1EQ12965 1108 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 ORC1Q13415 861 aa9.32□□□□□ -0.92
CLTCL1-204ENST00000458188 NR1I3Q14994 352 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms