RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 SELENOOQ9BVL4 669 aa13.96□□□□□ -0.18
TSFM-204ENST00000454289 KATNAL1Q9BW62 490 aa13.96□□□□□ -0.18
TSFM-204ENST00000454289 UVRAGQ9P2Y5 699 aa13.96□□□□□ -0.18
TSFM-204ENST00000454289 NXF1Q9UBU9 619 aaKnown RBP13.96□□□□□ -0.18
TSFM-204ENST00000454289 C17orf102A2RUQ5 167 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 ZMYND10O75800 440 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 C6orf222P0C671 652 aaPredicted RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 HOXC8P31273 242 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 NSFP46459 744 aaKnown RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 RAP1GAPP47736 663 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 FLT3LGP49771 235 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 RALGAPA2Q2PPJ7 1873 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 ZNF394Q53GI3 561 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 BEND6Q5SZJ8 279 aaPredicted RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 LLGL2Q6P1M3 1020 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 TMEM40Q8WWA1 233 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 ZNF606Q8WXB4 792 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 EIF2AQ9BY44 585 aaKnown RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 BCO2Q9BYV7 579 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 CXCL16Q9H2A7 254 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 AVENQ9NQS1 362 aaPredicted RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 TMEM59LQ9UK28 342 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 NOC2LQ9Y3T9 749 aaKnown RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 PGRMC1O00264 195 aaKnown RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 AOC2O75106 756 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 COMTP21964 271 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 RRM1P23921 792 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 BRD2P25440 801 aaKnown RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 TRIM32Q13049 653 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 ZNF667Q5HYK9 610 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 PHLDB2Q86SQ0 1253 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 ALG3Q92685 438 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.95□□□□□ -0.182e-7■■□□□ 14.2
TSFM-204ENST00000454289 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
TSFM-204ENST00000454289 DMGDHQ9UI17 866 aaKnown RBP13.95□□□□□ -0.18
TSFM-204ENST00000454289 SCN10AQ9Y5Y9 1956 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 ERLIN1O75477 346 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 SASH3O75995 380 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 MYBL1P10243 752 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
TSFM-204ENST00000454289 POLR2BP30876 1174 aaKnown RBP13.94□□□□□ -0.18
TSFM-204ENST00000454289 MARCKSL1P49006 195 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 GJA9P57773 515 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 SLC7A5Q01650 507 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 PRKCZQ05513 592 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 SNX17Q15036 470 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 WDR72Q3MJ13 1102 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 CCDC70Q6NSX1 233 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 C7orf31Q8N865 590 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 KRT35Q92764 455 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 TRIM11Q96F44 468 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 RPS6KC1Q96S38 1066 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 HINFPQ9BQA5 517 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 C11orf70Q9BRQ4 267 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 SNTG2Q9NY99 539 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 FAM53CQ9NYF3 392 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 C2CD2Q9Y426 696 aa13.94□□□□□ -0.18
TSFM-204ENST00000454289 ALDH1A1P00352 501 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 CDH8P55286 799 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 PTP4A2Q12974 167 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 C8orf74Q6P047 294 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 PHF13Q86YI8 300 aaPredicted RBP13.93□□□□□ -0.18
TSFM-204ENST00000454289 TFAP2BQ92481 460 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 CD101Q93033 1021 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 KRT12Q99456 494 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 TRIM7Q9C029 511 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 PGK1P00558 417 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 ATICP31939 592 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 YWHAEP62258 255 aaKnown RBP13.93□□□□□ -0.18
TSFM-204ENST00000454289 PCBP1Q15365 356 aaKnown RBP eCLIP13.93□□□□□ -0.18
TSFM-204ENST00000454289 GNASQ5JWF2 1037 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 SNX27Q96L92 541 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 AP1M1Q9BXS5 423 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 UPF3AQ9H1J1 476 aaKnown RBP13.93□□□□□ -0.18
TSFM-204ENST00000454289 CARD9Q9H257 536 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 VRTNQ9H8Y1 702 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 DPP3Q9NY33 737 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 ADAM22Q9P0K1 906 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 ITGA11Q9UKX5 1188 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 TTC7AQ9ULT0 858 aaPredicted RBP13.93□□□□□ -0.18
TSFM-204ENST00000454289 AGAP1Q9UPQ3 857 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 HES2Q9Y543 173 aa13.93□□□□□ -0.18
TSFM-204ENST00000454289 CENPFP49454 3210 aa13.92□□□□□ -0.18
TSFM-204ENST00000454289 MIF4GDA9UHW6 222 aaKnown RBP13.92□□□□□ -0.18
TSFM-204ENST00000454289 MYBL2P10244 700 aa13.92□□□□□ -0.18
TSFM-204ENST00000454289 MCM3P25205 808 aa13.92□□□□□ -0.18
TSFM-204ENST00000454289 ZNF211Q13398 564 aaPredicted RBP13.92□□□□□ -0.18
TSFM-204ENST00000454289 CXCL17Q6UXB2 119 aa13.92□□□□□ -0.18
TSFM-204ENST00000454289 APBB1IPQ7Z5R6 666 aaPredicted RBP13.92□□□□□ -0.18
TSFM-204ENST00000454289 NT5DC4Q86YG4 428 aa13.92□□□□□ -0.18
TSFM-204ENST00000454289 CD302Q8IX05 232 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms