RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 OPA1O60313 960 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CYP1A1P04798 512 aaPredicted RBP12.55□□□□□ -0.4
VTA1-203ENST00000452973 ALS2CLQ60I27 953 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 TTC27Q6P3X3 843 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 MON1BQ7L1V2 547 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 JAMLQ86YT9 394 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 FAM76AQ8TAV0 307 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 NIF3L1Q9GZT8 377 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 RABEP2Q9H5N1 569 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
VTA1-203ENST00000452973 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
VTA1-203ENST00000452973 STAG3L1P0CL83 205 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 RARAP10276 462 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 RPL7AP62424 266 aaKnown RBP12.54□□□□□ -0.4
VTA1-203ENST00000452973 IRX5P78411 483 aaPredicted RBP12.54□□□□□ -0.4
VTA1-203ENST00000452973 POU5F1Q01860 360 aaKnown RBP12.54□□□□□ -0.4
VTA1-203ENST00000452973 CEP85LQ5SZL2 805 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
VTA1-203ENST00000452973 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 PTPN18Q99952 460 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 PPME1Q9Y570 386 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 LACTBL1A8MY62 500 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 SMPD1P17405 629 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 HSD17B3P37058 310 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
VTA1-203ENST00000452973 NNTQ13423 1086 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 TCEAL1Q15170 157 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 TTMPQ5BVD1 217 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 LENG1Q96BZ8 264 aaPredicted RBP12.54□□□□□ -0.4
VTA1-203ENST00000452973 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 PTPRHQ9HD43 1115 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 VTA1Q9NP79 307 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 SETD4Q9NVD3 440 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
VTA1-203ENST00000452973 LRRC37A2A6NM11 1700 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 PHF2O75151 1096 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 ITGB3P05106 788 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 LACTBP83111 547 aaPredicted RBP12.53□□□□□ -0.4
VTA1-203ENST00000452973 PPFIA1Q13136 1202 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 KIZQ2M2Z5 673 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 CYP4A22Q5TCH4 519 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
VTA1-203ENST00000452973 IQCKQ8N0W5 287 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 TFAP2BQ92481 460 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 MAML3Q96JK9 1138 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 PRMT7Q9NVM4 692 aaPredicted RBP12.53□□□□□ -0.4
VTA1-203ENST00000452973 BCCIPQ9P287 314 aaKnown RBP eCLIP12.53□□□□□ -0.4
VTA1-203ENST00000452973 ASAP2O43150 1006 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 STRNO43815 780 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 ARF4P18085 180 aaPredicted RBP12.53□□□□□ -0.4
VTA1-203ENST00000452973 PROZP22891 400 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 ATP1A2P50993 1020 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 AP3M2P53677 418 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 KCNN1Q92952 543 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 TNFSF13BQ9Y275 285 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 DYNC1LI2O43237 492 aaPredicted RBP12.53□□□□□ -0.4
VTA1-203ENST00000452973 ADCY6O43306 1168 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 ERLIN2O94905 339 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 TRIP13Q15645 432 aaPredicted RBP12.53□□□□□ -0.4
VTA1-203ENST00000452973 NPLOC4Q8TAT6 608 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 FMO2Q99518 471 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 FAM114A2Q9NRY5 505 aa12.53□□□□□ -0.4
VTA1-203ENST00000452973 PI4K2BG5E9Z4 385 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 GOLGA8SH3BPF8 625 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 PPFIA4O75335 1185 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 MYBL1P10243 752 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 CHRNA3P32297 505 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 GCLCP48506 637 aaPredicted RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 TAS2R40P59535 323 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 ACVR2BQ13705 512 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 SURF1Q15526 300 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 ATP13A4Q4VNC1 1196 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 SGO2Q562F6 1265 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 MTHFD1LQ6UB35 978 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 ACSF2Q96CM8 615 aaPredicted RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 MCEEQ96PE7 176 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 HERPUD2Q9BSE4 406 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 RASAL2Q9UJF2 1139 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
VTA1-203ENST00000452973 CTNNA2P26232 953 aa12.52□□□□□ -0.41
VTA1-203ENST00000452973 HSPA9P38646 679 aaKnown RBP12.52□□□□□ -0.41
VTA1-203ENST00000452973 ASPAP45381 313 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms