RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 AKAP5P24588 427 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 GPC5P78333 572 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 ACAD10Q6JQN1 1059 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 RHOT2Q8IXI1 618 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 LRRC57Q8N9N7 239 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 ARRDC4Q8NCT1 418 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 SMG8Q8ND04 991 aaKnown RBP15.24■□□□□ 0.03
USP39-207ENST00000450066 TPCN2Q8NHX9 752 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 FAM124BQ9H5Z6 455 aaPredicted RBP15.24■□□□□ 0.03
USP39-207ENST00000450066 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
USP39-207ENST00000450066 SNX12Q9UMY4 172 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 POLIQ9UNA4 740 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 UNGP13051 313 aaPredicted RBP15.23■□□□□ 0.03
USP39-207ENST00000450066 KCNE1P15382 129 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 GUCY2FP51841 1108 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 SCARA5Q6ZMJ2 495 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 TRIM72Q6ZMU5 477 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 TMEM130Q8N3G9 435 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 CEP112Q8N8E3 955 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 BEST2Q8NFU1 509 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 ARHGEF26Q96DR7 871 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 BEGAINQ9BUH8 593 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 APOL6Q9BWW8 343 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 TLR10Q9BXR5 811 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 RNF39Q9H2S5 420 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 CYP3A43Q9HB55 503 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 MYH10P35580 1976 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 SMIM28A0A1B0GU29 152 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 CAND2O75155 1236 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 CYP1A1P04798 512 aaPredicted RBP15.23■□□□□ 0.03
USP39-207ENST00000450066 HADHBP55084 474 aaKnown RBP15.23■□□□□ 0.03
USP39-207ENST00000450066 MYO1EQ12965 1108 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 NFX1Q12986 1120 aaKnown RBP15.23■□□□□ 0.03
USP39-207ENST00000450066 TRIM71Q2Q1W2 868 aaKnown RBP15.23■□□□□ 0.03
USP39-207ENST00000450066 FAM26DQ5JW98 314 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 MEI1Q5TIA1 1274 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 SLFN11Q7Z7L1 901 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 SLC43A3Q8NBI5 491 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 LRRN4CLQ8ND94 238 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 PARP2Q9UGN5 583 aa15.23■□□□□ 0.03
USP39-207ENST00000450066 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
USP39-207ENST00000450066 A0A1W2PQ45 241 aaPredicted RBP15.22■□□□□ 0.03
USP39-207ENST00000450066 A0A1W2PQY0 241 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 EFCAB8A8MWE9 144 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 THAP12O43422 761 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 CENPCQ03188 943 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 FBXO47Q5MNV8 452 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 SYCE1Q8N0S2 351 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 LRRC52Q8N7C0 313 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 ZNF606Q8WXB4 792 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.22■□□□□ 0.03
USP39-207ENST00000450066 PDCL3Q9H2J4 239 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 OSGEPQ9NPF4 335 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 GTF3C4Q9UKN8 822 aa15.22■□□□□ 0.03
USP39-207ENST00000450066 XPOTO43592 962 aaKnown RBP15.21■□□□□ 0.03
USP39-207ENST00000450066 TADA3O75528 432 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 FTCDO95954 541 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 TCP1P17987 556 aaKnown RBP15.21■□□□□ 0.03
USP39-207ENST00000450066 PPP1R2P3Q6NXS1 205 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 TTC39CQ8N584 583 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 SH3TC2Q8TF17 1288 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 C18orf25Q96B23 403 aaPredicted RBP15.21■□□□□ 0.03
USP39-207ENST00000450066 SMYD3Q9H7B4 428 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 AGO3Q9H9G7 860 aaKnown RBP15.21■□□□□ 0.03
USP39-207ENST00000450066 ERVK-5Q9HDB9 667 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 TUBGCP4Q9UGJ1 667 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 PHF24Q9UPV7 400 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 NCK2O43639 380 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 SRGAP2O75044 1071 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 CD4P01730 458 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 CYP1A2P05177 515 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 TNNC1P63316 161 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 ZNF394Q53GI3 561 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 GLRA4Q5JXX5 417 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 HACE1Q8IYU2 909 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 CYFIP2Q96F07 1278 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 TRIM11Q96F44 468 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 OSBPL9Q96SU4 736 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 STARD7Q9NQZ5 370 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 FAM105AQ9NUU6 356 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 KLK14Q9P0G3 267 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 PUF60Q9UHX1 559 aaKnown RBP15.21■□□□□ 0.03
USP39-207ENST00000450066 PADI3Q9ULW8 664 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 COG5Q9UP83 839 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 SQORQ9Y6N5 450 aa15.21■□□□□ 0.03
USP39-207ENST00000450066 TRIP11Q15643 1979 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 A0A0U1RQG5 324 aaPredicted RBP15.2■□□□□ 0.02
USP39-207ENST00000450066 KBTBD13C9JR72 458 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 TLR3O15455 904 aaKnown RBP15.2■□□□□ 0.02
USP39-207ENST00000450066 CILPO75339 1184 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 MTA2O94776 668 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 PAEPP09466 180 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 ZSCAN20P17040 1043 aaPredicted RBP15.2■□□□□ 0.02
USP39-207ENST00000450066 CYP3A5P20815 502 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 NSFP46459 744 aaKnown RBP15.2■□□□□ 0.02
USP39-207ENST00000450066 RAP1GAPP47736 663 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 CDH8P55286 799 aa15.2■□□□□ 0.02
USP39-207ENST00000450066 PAK2Q13177 524 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms