RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 RPRD1AQ96P16 312 aaPredicted RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 SENP2Q9HC62 589 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PDE11AQ9HCR9 933 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 DIS3Q9Y2L1 958 aaKnown RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 TOMM20Q15388 145 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 JADE3Q92613 823 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 MTG1Q9BT17 334 aaPredicted RBP13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 FHDC1Q9C0D6 1143 aaPredicted RBP13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 CCDC90BQ9GZT6 254 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 COPS7BQ9H9Q2 264 aaPredicted RBP13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 NMRK2Q9NPI5 230 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 OLFML3Q9NRN5 406 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 E2F8A0AVK6 867 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 APBA1Q02410 837 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 STILQ15468 1287 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 SIX5Q8N196 739 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 BRD8Q9H0E9 1235 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 SPACA6W5XKT8 324 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 MAPK13O15264 365 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 BRAFP15056 766 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 SGCGQ13326 291 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 CEP68Q76N32 757 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 SRBD1Q8N5C6 995 aaKnown RBP13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 ZNF614Q8N883 585 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 SPATA18Q8TC71 538 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 TRPM5Q9NZQ8 1165 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 SPASTQ9UBP0 616 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 NCKAP1Q9Y2A7 1128 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 GUCA1CO95843 209 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 ACADSBP45954 432 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 IFT88Q13099 833 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 PTPAQ15257 358 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 ANKMY2Q8IV38 441 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 GPT2Q8TD30 523 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 TP53BP2Q13625 1128 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 APPL1Q9UKG1 709 aa13.37□□□□□ -0.27
AC006001.3-201ENST00000449307 AP1G2O75843 785 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 HIST2H2ACQ16777 129 aaPredicted RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 BTBD6Q96KE9 485 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 ING2Q9H160 280 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 ECT2Q9H8V3 914 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 HEATR9A2RTY3 570 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 ORC4O43929 436 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 EPM2AIP1Q7L775 607 aaPredicted RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 HERC6Q8IVU3 1022 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 MIR1-1HGQ9H1L0 117 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 WDCPQ9H6R7 721 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 CYB561D2O14569 222 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 GUCY1A2P33402 732 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 RGS4P49798 205 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 ARSEP51690 589 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 SNRNP35Q16560 246 aaKnown RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 KLHL29Q96CT2 875 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 NFKBIL1Q9UBC1 381 aaPredicted RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 PNMA8BQ9ULN7 279 aaPredicted RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 CTIFO43310 598 aaKnown RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 ENGASEQ8NFI3 743 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 PYGBP11216 843 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 RESTQ13127 1097 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 NBPF15Q8N660 670 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 MRFAP1L1Q96HT8 127 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 PSD3Q9NYI0 1048 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 ABCC3O15438 1527 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 SCP2P22307 547 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 GRAMD1BQ3KR37 738 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 PHF21AQ96BD5 680 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 KIFC3Q9BVG8 833 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 KLF15Q9UIH9 416 aa13.36□□□□□ -0.27
AC006001.3-201ENST00000449307 STK36Q9NRP7 1315 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 PNPLA4P41247 253 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 DAB2P98082 770 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 ORC1Q13415 861 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 FBXO28Q9NVF7 368 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 KIAA0391O15091 583 aaKnown RBP13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 APRTP07741 180 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 FGFR1P11362 822 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 CLCN3P51790 818 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 RBBP8NLQ8NC74 664 aaPredicted RBP13.35□□□□□ -0.27
AC006001.3-201ENST00000449307 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms