RNA–Protein interactions for RNA: ENST00000447404.6

STRBP-204, Transcript of spermatid perinuclear RNA binding protein, human

APPRIS P1 TSL 2 BASIC

Gene STRBP, Length 6,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRBP-204	ENST00000447404	POTEE	Q6S8J3	1075 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	FRA10AC1	Q70Z53	315 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	CDKL2	Q92772	493 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	MAF1	Q9H063	256 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	DDX4	Q9NQI0	724 aa	Known RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	DDX41	Q9UJV9	622 aa	Known RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	PCDHA11	Q9Y5I1	949 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	SCIN	Q9Y6U3	715 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	ITGAX	P20702	1163 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	OR1D2	P34982	312 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	GARS	P41250	739 aa	Known RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	SP2	Q02086	613 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	DNM1	Q05193	864 aa	Known RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	ASAP3	Q8TDY4	903 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	CXorf40A	Q8TE69	158 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	MAP4K1	Q92918	833 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	ARL8A	Q96BM9	186 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	STRADB	Q9C0K7	418 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	TRIM45	Q9H8W5	580 aa	Predicted RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	SNTG2	Q9NY99	539 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	CA14	Q9ULX7	337 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	C10orf71	Q711Q0	1435 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	PDZK1P1	A8MUH7	402 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404		E5RI56	91 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	MCF2L	O15068	1137 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	SERPIND1	P05546	499 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	FGFR2	P21802	821 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	TPI1	P60174	286 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	FKBP3	Q00688	224 aa	Known RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	REST	Q13127	1097 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	TEX35	Q5T0J7	233 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	TATDN1	Q6P1N9	297 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	HVCN1	Q96D96	273 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	CINP	Q9BW66	212 aa	Predicted RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	NDFIP2	Q9NV92	336 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	SUN2	Q9UH99	717 aa		6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	POLR1A	O95602	1720 aa	Predicted RBP	6.23	□□□□□ -1.41
STRBP-204	ENST00000447404	TMEM247	A6NEH6	219 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	OGT	O15294	1046 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	BUB1	O43683	1085 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	COBL	O75128	1261 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	MTA2	O94776	668 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TDP2	O95551	362 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ACO1	P21399	889 aa	Known RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	HNF1B	P35680	557 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	MLH1	P40692	756 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	PAPOLA	P51003	745 aa	Known RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	MAP9	Q49MG5	647 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ITPRIPL1	Q6GPH6	555 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	MTHFD1L	Q6UB35	978 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ZNF852	Q6ZMS4	543 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	CNGA4	Q8IV77	575 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ZFPM1	Q8IX07	1006 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	KCTD17	Q8N5Z5	321 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	POF1B	Q8WVV4	589 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	HPS3	Q969F9	1004 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	SFXN1	Q9H9B4	322 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	SOHLH2	Q9NX45	425 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	KLHL8	Q9P2G9	620 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	COL1A1	P02452	1464 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404		E9PMD0	336 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	FOXD2	O60548	495 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	GJA8	P48165	433 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	NASP	P49321	788 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	SKP1	P63208	163 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	C2orf27A	Q580R0	203 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	HECTD3	Q5T447	861 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	CFAP36	Q96G28	342 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	NUDCD1	Q96RS6	583 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ELOVL4	Q9GZR5	314 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	GDPD2	Q9HCC8	539 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	DUS2	Q9NX74	493 aa	Known RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	HACD3	Q9P035	362 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ABI3	Q9P2A4	366 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3D	A0A087WVF3	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3I	A0A087WXS9	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3E	A0A087X179	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3K	A0A087X1G2	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3F	A6NER0	549 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3L	B9A6J9	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	AGRP	O00253	132 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	SLC26A4	O43511	780 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3H	P0C7X1	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	KRT15	P19012	456 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ACOT2	P49753	483 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TMTC4	Q5T4D3	741 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	ANKS6	Q68DC2	871 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	KRT39	Q6A163	491 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3G	Q6DHY5	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3C	Q6IPX1	549 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	KLHL35	Q6PF15	583 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	CDR2L	Q86X02	465 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	TBC1D3	Q8IZP1	549 aa	Predicted RBP	6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	RNF217	Q8TC41	542 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	MCOLN3	Q8TDD5	553 aa		6.22	□□□□□ -1.41
STRBP-204	ENST00000447404	USP33	Q8TEY7	942 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms