RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 AGAP1Q9UPQ3 857 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 CDY1Q9Y6F8 540 aa12.87□□□□□ -0.35
RFC4-208ENST00000447345 GRXCR2A6NFK2 248 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 TGM5O43548 720 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 WEE2P0C1S8 567 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 ODC1P11926 461 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
RFC4-208ENST00000447345 OR1D2P34982 312 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 TAF6P49848 677 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
RFC4-208ENST00000447345 LILRA4P59901 499 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 SMAD4Q13485 552 aaKnown RBP12.86□□□□□ -0.35
RFC4-208ENST00000447345 STIM1Q13586 685 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 SV2CQ496J9 727 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 CTXN3Q4LDR2 81 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 ZCWPW2Q504Y3 356 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 RARS2Q5T160 578 aaKnown RBP12.86□□□□□ -0.35
RFC4-208ENST00000447345 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 SYCE2Q6PIF2 218 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 RSPO2Q6UXX9 243 aaPredicted RBP12.86□□□□□ -0.35
RFC4-208ENST00000447345 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 SLC9A9Q8IVB4 645 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 FEZF2Q8TBJ5 459 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 PLEKHO2Q8TD55 490 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 SENP8Q96LD8 212 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 ZNF560Q96MR9 790 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 NECAB3Q96P71 396 aaPredicted RBP12.86□□□□□ -0.35
RFC4-208ENST00000447345 TSG101Q99816 390 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 GZF1Q9H116 711 aaPredicted RBP12.86□□□□□ -0.35
RFC4-208ENST00000447345 NUP62CLQ9H1M0 184 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 CLSTN2Q9H4D0 955 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 DMAC2Q9NW81 257 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 FNIP2Q9P278 1114 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 ITGA11Q9UKX5 1188 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 CTNND2Q9UQB3 1225 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 FRMD4BQ9Y2L6 1034 aa12.86□□□□□ -0.35
RFC4-208ENST00000447345 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
RFC4-208ENST00000447345 M0QZQ0 153 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 PSMA7O14818 248 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 MBTPS2O43462 519 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 AKAP3O75969 853 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 BMP6P22004 513 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
RFC4-208ENST00000447345 DLG4P78352 724 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 YWHAHQ04917 246 aaPredicted RBP12.85□□□□□ -0.35
RFC4-208ENST00000447345 BIRC3Q13489 604 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 MORC3Q14149 939 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 DUOXA2Q1HG44 320 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 ZNF280DQ6N043 979 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 TMC5Q6UXY8 1006 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 TMEM184AQ6ZMB5 413 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 USP37Q86T82 979 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 ADSSL1Q8N142 457 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 SMRP1Q8NCR6 262 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 APPL2Q8NEU8 664 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 MFSD14AQ96MC6 490 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 MMRN2Q9H8L6 949 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 FBXL5Q9UKA1 691 aa12.85□□□□□ -0.35
RFC4-208ENST00000447345 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
RFC4-208ENST00000447345 USP15Q9Y4E8 981 aaPredicted RBP12.85□□□□□ -0.35
RFC4-208ENST00000447345 MYH10P35580 1976 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 KPNA7A9QM74 516 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 H7C4K7 107 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 CYB561D2O14569 222 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 RFPL2O75678 378 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 OR4Q2P0C623 313 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 TRIM49P0CI25 452 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 TRIM49CP0CI26 452 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 BMP1P13497 986 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 CPB1P15086 417 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 RPL13P26373 211 aaKnown RBP12.84□□□□□ -0.35
RFC4-208ENST00000447345 CDR1P51861 262 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 RBP5P82980 135 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 ROR1Q01973 937 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 ADAM9Q13443 819 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 ANKRD40Q6AI12 368 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 OVOS1Q6IE37 1185 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 CXorf38Q8TB03 319 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 GPT2Q8TD30 523 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 ADAMTS19Q8TE59 1207 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 ZNF516Q92618 1163 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 SFXN1Q9H9B4 322 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 BACE2Q9Y5Z0 518 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 PTPRDP23468 1912 aa12.84□□□□□ -0.35
RFC4-208ENST00000447345 WDR27A2RRH5 827 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 PHACTR2O75167 634 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 KRT13P13646 458 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 SP100P23497 879 aaPredicted RBP12.83□□□□□ -0.36
RFC4-208ENST00000447345 PNPLA4P41247 253 aa12.83□□□□□ -0.36
RFC4-208ENST00000447345 STX17P56962 302 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms