RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	PCYOX1	Q9UHG3	505 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	NAV1	Q8NEY1	1877 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312		F8VP50	259 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	FGFR1	P11362	822 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	ADRA1D	P25100	572 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	DSG3	P32926	999 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	RCN2	Q14257	317 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	SETDB1	Q15047	1291 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	BMT2	Q1RMZ1	405 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	TAF1B	Q53T94	588 aa	Predicted RBP	13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	CWF19L1	Q69YN2	538 aa	Known RBP	13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	SCYL3	Q8IZE3	742 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	HIPK4	Q8NE63	616 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	TTC17	Q96AE7	1141 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	TCHP	Q9BT92	498 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	OSBPL8	Q9BZF1	889 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	DCLK3	Q9C098	648 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	KMT5A	Q9NQR1	393 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	RAB20	Q9NX57	234 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	FRMPD4	Q14CM0	1322 aa		13.27	□□□□□ -0.29
DDR1-238	ENST00000446312	TLR3	O15455	904 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	AHCYL1	O43865	530 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	KRT1	P04264	644 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	IMPDH2	P12268	514 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	SLC25A41	Q8N5S1	370 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	LRRC8C	Q8TDW0	803 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	CKAP2	Q8WWK9	683 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	LRRC37B	Q96QE4	947 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	STMN4	Q9H169	189 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	PIDD1	Q9HB75	910 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	GINM1	Q9NU53	330 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	DMAC2	Q9NW81	257 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	PARP2	Q9UGN5	583 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	CHKB	Q9Y259	395 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	F7	P08709	466 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	KRT4	P19013	534 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	ABL2	P42684	1182 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	ITIH4	Q14624	930 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	EML3	Q32P44	896 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	RC3H1	Q5TC82	1133 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	LVRN	Q6Q4G3	990 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	EEPD1	Q7L9B9	569 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	MFN1	Q8IWA4	741 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	FBF1	Q8TES7	1133 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	FNBP1	Q96RU3	617 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	TRIM56	Q9BRZ2	755 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	ZNF341	Q9BYN7	854 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	TJP2	Q9UDY2	1190 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	NEU2	Q9Y3R4	380 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	NUMBL	Q9Y6R0	609 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	LAMB1	P07942	1786 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	GTPBP10	A4D1E9	387 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	EIF3D	O15371	548 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	NOV	P48745	357 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	CTCF	P49711	727 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	MTMR1	Q13613	665 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	KRT39	Q6A163	491 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	MFSD7	Q6UXD7	560 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	TTC7B	Q86TV6	843 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	LRRC6	Q86X45	466 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	RFWD2	Q8NHY2	731 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	PHACTR1	Q9C0D0	580 aa		13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	PIH1D1	Q9NWS0	290 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-238	ENST00000446312	SPDYE5	A6NIY4	337 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	POLRMT	O00411	1230 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	NPTX2	P47972	431 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	CDR2	Q01850	454 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	BNIP1	Q12981	228 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	TMEM63B	Q5T3F8	832 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	CC2D2B	Q6DHV5	1058 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	DCUN1D2	Q6PH85	259 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	ARHGAP27	Q6ZUM4	889 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	EFCAB3	Q8N7B9	438 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	FBXL13	Q8NEE6	735 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	RUNDC3B	Q96NL0	473 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	MROH7	Q68CQ1	1323 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	ATXN2	Q99700	1313 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	LTBP4	Q8N2S1	1624 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	LRRIQ4	A6NIV6	560 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	WEE2	P0C1S8	567 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	GHR	P10912	638 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	MAGEA10	P43363	369 aa	Predicted RBP	13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	IL9R	Q01113	521 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	CUL3	Q13618	768 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	TFDP1	Q14186	410 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	CTAGE3P	Q8IX95	158 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	FAM71A	Q8IYT1	594 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	EMC1	Q8N766	993 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	C1orf131	Q8NDD1	294 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	HELQ	Q8TDG4	1101 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	UCMA	Q8WVF2	138 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	PSPC1	Q8WXF1	523 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	IFT74	Q96LB3	600 aa		13.25	□□□□□ -0.29
DDR1-238	ENST00000446312	MCEE	Q96PE7	176 aa		13.25	□□□□□ -0.29

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