RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 CCDC77Q9BR77 488 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 UMODL1Q5DID0 1318 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 C2orf71A6NGG8 1288 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 CYP24A1Q07973 514 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 DMP1Q13316 513 aaPredicted RBP15.06■□□□□ 0
ERCC3-203ENST00000445889 MYBPC2Q14324 1141 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 ZBTB41Q5SVQ8 909 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 MFSD7Q6UXD7 560 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 RFX8Q6ZV50 586 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 LONP2Q86WA8 852 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 ANKRD35Q8N283 1001 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 CCDC89Q8N998 374 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 GRK7Q8WTQ7 553 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 CEP170P1Q96L14 293 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 PTPRJQ12913 1337 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 F8VP50 259 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 ASMTLO95671 621 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 CCNB1P14635 433 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 SSTR1P30872 391 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 RAD23BP54727 409 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 RNF43Q68DV7 783 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 TRABD2AQ86V40 505 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 PLCD4Q9BRC7 762 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 MAK16Q9BXY0 300 aaKnown RBP15.06■□□□□ 0
ERCC3-203ENST00000445889 EHMT1Q9H9B1 1298 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 UBN1Q9NPG3 1134 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 BATF3Q9NR55 127 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 C1orf112Q9NSG2 853 aa15.06■□□□□ 0
ERCC3-203ENST00000445889 T-ENOLP0DO92 83 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 MAMLD1Q13495 774 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 TAF1BQ53T94 588 aaPredicted RBP15.05■□□□□ 0
ERCC3-203ENST00000445889 PPP1R21Q6ZMI0 780 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 FAM13CQ8NE31 585 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 SLCO2A1Q92959 643 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 MASTLQ96GX5 879 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 NAF1Q96HR8 494 aaKnown RBP15.05■□□□□ 0
ERCC3-203ENST00000445889 TBC1D10AQ9BXI6 508 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 PCDHB4Q9Y5E5 795 aa15.05■□□□□ 0
ERCC3-203ENST00000445889 PROSCO94903 275 aa15.05■□□□□ -0
ERCC3-203ENST00000445889 KRT4P19013 534 aa15.05■□□□□ -0
ERCC3-203ENST00000445889 PDIA2Q13087 525 aaKnown RBP15.05■□□□□ -0
ERCC3-203ENST00000445889 PLEKHG4Q58EX7 1191 aa15.05■□□□□ -0
ERCC3-203ENST00000445889 MTDHQ86UE4 582 aaKnown RBP15.05■□□□□ -0
ERCC3-203ENST00000445889 SERPINA10Q9UK55 444 aa15.05■□□□□ -0
ERCC3-203ENST00000445889 IVNS1ABPQ9Y6Y0 642 aa15.05■□□□□ -0
ERCC3-203ENST00000445889 AHDC1Q5TGY3 1603 aaPredicted RBP15.05■□□□□ -0
ERCC3-203ENST00000445889 SMNDC1O75940 238 aaKnown RBP eCLIP15.04■□□□□ -0
ERCC3-203ENST00000445889 YY1P25490 414 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 KLRC2P26717 231 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 POLGP54098 1239 aaPredicted RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 RPS6P62753 249 aaKnown RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 MKRN3Q13064 507 aaKnown RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 STAT4Q14765 748 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 CCNG2Q16589 344 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 RFWD3Q6PCD5 774 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 LRRC8CQ8TDW0 803 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 NUDCD1Q96RS6 583 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 TXLNGQ9NUQ3 528 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 ZNF536O15090 1300 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 YDJCA8MPS7 323 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 NCKAP1LP55160 1127 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 NLRP11P59045 1033 aaKnown RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 NFX1Q12986 1120 aaKnown RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 SMTNL2Q2TAL5 461 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 BRDTQ58F21 947 aaPredicted RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 LVRNQ6Q4G3 990 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 RHOT1Q8IXI2 618 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 C12orf56Q8IXR9 622 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 KCTD17Q8N5Z5 321 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 SLC7A6OSQ96CW6 309 aaPredicted RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 PRR11Q96HE9 360 aaPredicted RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 GJD4Q96KN9 370 aaPredicted RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 RAB3IPQ96QF0 476 aaPredicted RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 SMC6Q96SB8 1091 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 ZNF341Q9BYN7 854 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 APOBEC3GQ9HC16 384 aaKnown RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 METTL5Q9NRN9 209 aaKnown RBP15.04■□□□□ -0
ERCC3-203ENST00000445889 GABBR1Q9UBS5 961 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 COQ4Q9Y3A0 265 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 SIPA1L1O43166 1804 aa15.04■□□□□ -0
ERCC3-203ENST00000445889 EME2A4GXA9 379 aaPredicted RBP15.03■□□□□ -0
ERCC3-203ENST00000445889 SGK1O00141 431 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 HLA-DRAP01903 254 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 ADRA1DP25100 572 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 PCK1P35558 622 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 PIK3CAP42336 1068 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 MAPK6Q16659 721 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 KCNT1Q5JUK3 1230 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 HHATQ5VTY9 493 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 CLEC4DQ8WXI8 215 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 FNBP1Q96RU3 617 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 OSBPL1AQ9BXW6 950 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 GREB1LQ9C091 1923 aaPredicted RBP15.03■□□□□ -0
ERCC3-203ENST00000445889 A0A0G2JND7 137 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 ZNF862O60290 1169 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 CAP2P40123 477 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 TDRD10Q5VZ19 366 aaKnown RBP15.03■□□□□ -0
ERCC3-203ENST00000445889 MON1BQ7L1V2 547 aa15.03■□□□□ -0
ERCC3-203ENST00000445889 OTOAQ7RTW8 1153 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms