RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 C2CD2Q9Y426 696 aa18.58■□□□□ 0.56
LIME1-202ENST00000444951 INPPL1O15357 1258 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 XPOTO43592 962 aaKnown RBP18.57■□□□□ 0.56
LIME1-202ENST00000444951 B4GALT3O60512 393 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 ZC3H11AO75152 810 aaKnown RBP eCLIP18.57■□□□□ 0.56
LIME1-202ENST00000444951 TPM2P07951 284 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 KRT19P08727 400 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 NRIP1P48552 1158 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 RBM10P98175 930 aaKnown RBP18.57■□□□□ 0.56
LIME1-202ENST00000444951 PLCB2Q00722 1185 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 SMAD4Q13485 552 aaKnown RBP18.57■□□□□ 0.56
LIME1-202ENST00000444951 MAN2A1Q16706 1144 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 CWH43Q9H720 699 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.57■□□□□ 0.567e-7■■■■■ 94.2
LIME1-202ENST00000444951 DNAJB4Q9UDY4 337 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 PRKAG3Q9UGI9 489 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 CD207Q9UJ71 328 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
LIME1-202ENST00000444951 MUC6Q6W4X9 2439 aa18.57■□□□□ 0.56
LIME1-202ENST00000444951 WDFY4Q6ZS81 3184 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 DCXO43602 365 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 STX10O60499 249 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 SERPINC1P01008 464 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 AFPP02771 609 aaKnown RBP18.56■□□□□ 0.56
LIME1-202ENST00000444951 ITGB3P05106 788 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 PBX3P40426 434 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 OR1G1P47890 313 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 NDUFV1P49821 464 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 COPB1P53618 953 aaKnown RBP18.56■□□□□ 0.56
LIME1-202ENST00000444951 KCNH2Q12809 1159 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 TUSC3Q13454 348 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 NAB2Q15742 525 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 ZBTB6Q15916 424 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 SCARA3Q6AZY7 606 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 TRAPPC11Q7Z392 1133 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 EFHBQ8N7U6 833 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 COLGALT1Q8NBJ5 622 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 VN1R2Q8NFZ6 395 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 NRDE2Q9H7Z3 1164 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 LIMA1Q9UHB6 759 aaKnown RBP18.56■□□□□ 0.56
LIME1-202ENST00000444951 BARX2Q9UMQ3 279 aaPredicted RBP18.56■□□□□ 0.56
LIME1-202ENST00000444951 FAM50BQ9Y247 325 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 HCN4Q9Y3Q4 1203 aa18.56■□□□□ 0.56
LIME1-202ENST00000444951 R3HCC1Q9Y3T6 440 aaKnown RBP18.56■□□□□ 0.56
LIME1-202ENST00000444951 PDCD11Q14690 1871 aaKnown RBP18.56■□□□□ 0.56
LIME1-202ENST00000444951 PER2O15055 1255 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 FGF18O76093 207 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 MXI1P50539 228 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 ERVFC1P60507 584 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 CLDN10P78369 228 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 MYL7Q01449 175 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 CBWD6Q4V339 395 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 VWA3BQ502W6 1294 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 CBWD3Q5JTY5 395 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 CBWD5Q5RIA9 395 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
LIME1-202ENST00000444951 SV2AQ7L0J3 742 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 NT5DC4Q86YG4 428 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 C1orf127Q8N9H9 656 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 ELMO3Q96BJ8 720 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 TSPAN18Q96SJ8 248 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 PAAF1Q9BRP4 392 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 TMEM8AQ9HCN3 771 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
LIME1-202ENST00000444951 PRG3Q9Y2Y8 225 aaPredicted RBP18.55■□□□□ 0.56
LIME1-202ENST00000444951 PRR33A8MZF0 331 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 NT5C1B-RDH14C9J2C7 533 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 PPEF2O14830 753 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 C4BPAP04003 597 aaKnown RBP18.54■□□□□ 0.56
LIME1-202ENST00000444951 ALADP13716 330 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 POLR2BP30876 1174 aaKnown RBP18.54■□□□□ 0.56
LIME1-202ENST00000444951 PIK3CAP42336 1068 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 FMO5P49326 533 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 CLCNKBP51801 687 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 AP3M2P53677 418 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 TRPC3Q13507 836 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 MIIPQ5JXC2 388 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 KRT39Q6A163 491 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 COLGALT2Q8IYK4 626 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 HASPINQ8TF76 798 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 NDST4Q9H3R1 872 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 PCDHB12Q9Y5F1 795 aa18.54■□□□□ 0.56
LIME1-202ENST00000444951 F8W810 466 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 PODXLO00592 558 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 TECTAO75443 2155 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 CYP3A5P20815 502 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 GTF2H1P32780 548 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 SLC11A1P49279 550 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 BCAR1P56945 870 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 FANCCQ00597 558 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 ENPEPQ07075 957 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 DSC1Q08554 894 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 C9orf57Q5W0N0 161 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 SMRP1Q8NCR6 262 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 TAS1R2Q8TE23 839 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 RSPH1Q8WYR4 309 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 CRACR2AQ9BSW2 395 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 TLR9Q9NR96 1032 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 MUTYHQ9UIF7 546 aa18.53■□□□□ 0.56
LIME1-202ENST00000444951 SIX4Q9UIU6 781 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms