RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RAB33AQ14088 237 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 MORC3Q14149 939 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 SV2CQ496J9 727 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 LLGL2Q6P1M3 1020 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 LILRA6Q6PI73 481 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 DSTYKQ6XUX3 929 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 USP37Q86T82 979 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 TMEM130Q8N3G9 435 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 CXorf38Q8TB03 319 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 TMC2Q8TDI7 906 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 PARD3BQ8TEW8 1205 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 MTMR12Q9C0I1 747 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 PLEKHA4Q9H4M7 779 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 KIAA1468Q9P260 1216 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 DSEQ9UL01 958 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 PRUNE2Q8WUY3 3088 aa16.23■□□□□ 0.19
CSNK1E-210ENST00000442216 GRXCR2A6NFK2 248 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 PSMA7O14818 248 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 MBTPS2O43462 519 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 OAZ2O95190 189 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 ITGB3P05106 788 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 CYP11A1P05108 521 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 ODC1P11926 461 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 EPCAMP16422 314 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 TNNI1P19237 187 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 POLR2BP30876 1174 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 KCNQ1P51787 676 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 MCCD1P59942 119 aaPredicted RBP16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 RBM10P98175 930 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 ITIH3Q06033 890 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 ADAM9Q13443 819 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 PTCRAQ6ISU1 281 aaPredicted RBP16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 SLC8B1Q6J4K2 584 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 ZNF280DQ6N043 979 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 SYCE2Q6PIF2 218 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 FOXR2Q6PJQ5 311 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 RTL10Q7L3V2 364 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 CSGALNACT2Q8N6G5 542 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 OR5B17Q8NGF7 314 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 BORCS6Q96GS4 357 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 SENP8Q96LD8 212 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 TSG101Q99816 390 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 MKNK1Q9BUB5 465 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 S1PR5Q9H228 398 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 CLSTN2Q9H4D0 955 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 AGAP1Q9UPQ3 857 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 R3HCC1Q9Y3T6 440 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 C2orf16Q68DN1 1984 aa16.22■□□□□ 0.19
CSNK1E-210ENST00000442216 PTPRJQ12913 1337 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 KPNA7A9QM74 516 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 IKBKBO14920 756 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 SPTLC1O15269 473 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 TGM5O43548 720 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 PAPLNO95428 1278 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 DLATP10515 647 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 RPL17P18621 184 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 CCNE1P24864 410 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 PSMC2P35998 433 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 CASP4P49662 377 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 YWHAHQ04917 246 aaPredicted RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 SMAD2Q15796 467 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 CEP135Q66GS9 1140 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 INTS8Q75QN2 995 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 ZC3H3Q8IXZ2 948 aaKnown RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 CCDC127Q96BQ5 260 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 RHOBTB2Q9BYZ6 727 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 GZF1Q9H116 711 aaPredicted RBP16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 SFXN1Q9H9B4 322 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 GDAP2Q9NXN4 497 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 SIX4Q9UIU6 781 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 CDY1Q9Y6F8 540 aa16.21■□□□□ 0.19
CSNK1E-210ENST00000442216 TULP1O00294 542 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 CETN3O15182 167 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 KRT19P08727 400 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 BMP6P22004 513 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 OR1D2P34982 312 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 MYO1EQ12965 1108 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 CAMK4Q16566 473 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 CTXN3Q4LDR2 81 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 LMBRD2Q68DH5 695 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 CYP26C1Q6V0L0 522 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 PALB2Q86YC2 1186 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 CMASQ8NFW8 434 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 ZNF461Q8TAF7 563 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 SPATA18Q8TC71 538 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 SUSD6Q92537 303 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 ADAM7Q9H2U9 754 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 MAN1C1Q9NR34 630 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 PRKAG3Q9UGI9 489 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 FBXL5Q9UKA1 691 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 FBXW11Q9UKB1 542 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 MAFFQ9ULX9 164 aa16.2■□□□□ 0.18
CSNK1E-210ENST00000442216 DENND4AQ7Z401 1863 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 BICDL2A1A5D9 508 aa16.19■□□□□ 0.18
CSNK1E-210ENST00000442216 OR6C75A6NL08 312 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms