RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PLEKHA5Q9HAU0 1116 aa6.55□□□□□ -1.36
PTPRR-204ENST00000440835 OBP2AQ9NY56 170 aa6.55□□□□□ -1.36
PTPRR-204ENST00000440835 HES2Q9Y543 173 aa6.55□□□□□ -1.36
PTPRR-204ENST00000440835 ASB3Q9Y575 518 aa6.55□□□□□ -1.36
PTPRR-204ENST00000440835 FHOD1Q9Y613 1164 aa6.55□□□□□ -1.36
PTPRR-204ENST00000440835 CITO14578 2027 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 NOTCH4Q99466 2003 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 B4GALT5O43286 388 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ZRANB2O95218 330 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 LIG1P18858 919 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CYP3A5P20815 502 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 GUCY2CP25092 1073 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 HOXA6P31267 233 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PLA2G4AP47712 749 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 MTA1Q13330 715 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 MRPL58Q14197 206 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 LRRC32Q14392 662 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CCDC183Q5T5S1 534 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PRSS55Q6UWB4 352 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 NPAS3Q8IXF0 933 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CELF5Q8N6W0 485 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 RSAD2Q8WXG1 361 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 NTPCRQ9BSD7 190 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 MRPL4Q9BYD3 311 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 C8orf33Q9H7E9 229 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 SPATA6Q9NWH7 488 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 SNTG2Q9NY99 539 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 MRPS23Q9Y3D9 190 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PAXBP1Q9Y5B6 917 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 NUP210Q8TEM1 1887 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 K7ERI5 159 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 XPOTO43592 962 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 TPM3P06753 285 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ATF2P15336 505 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 OR1D2P34982 312 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CCR3P51677 355 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 MCCD1P59942 119 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 GPC5P78333 572 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 NR5A1Q13285 461 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 VARS2Q5ST30 1063 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 LAIR1Q6GTX8 287 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PARM1Q6UWI2 310 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 SYNPOQ8N3V7 929 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 SLC7A14Q8TBB6 771 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PIGOQ8TEQ8 1089 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 SPIRE2Q8WWL2 714 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PTPRHQ9HD43 1115 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 AFF4Q9UHB7 1163 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 FAM186AA6NE01 2351 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 FAM170BA6NMN3 283 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 BTBD18B2RXH4 712 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ZBTB39O15060 712 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ADCY1Q08828 1119 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 EARS2Q5JPH6 523 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 DGKKQ5KSL6 1271 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CYP4A22Q5TCH4 519 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ATL3Q6DD88 541 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ZNF280DQ6N043 979 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ZPBP2Q6X784 338 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CD302Q8IX05 232 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 MAML2Q8IZL2 1156 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 BEST2Q8NFU1 509 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CXorf38Q8TB03 319 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 FGF14Q92915 247 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 EXOC4Q96A65 974 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 SUSD3Q96L08 255 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ZNF396Q96N95 335 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ACO2Q99798 780 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 CHRDQ9H2X0 955 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 ZFP14Q9HCL3 533 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 KLK14Q9P0G3 267 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 NCDNQ9UBB6 729 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 DNMT3BQ9UBC3 853 aaKnown RBP6.54□□□□□ -1.36
PTPRR-204ENST00000440835 GMEB2Q9UKD1 530 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 RAB23Q9ULC3 237 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 PCDHB8Q9UN66 801 aa6.54□□□□□ -1.36
PTPRR-204ENST00000440835 SMIM28A0A1B0GU29 152 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 CASTOR2A6NHX0 329 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 OR6C75A6NL08 312 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 CCL16O15467 120 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 MED24O75448 989 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 B3GAT3O94766 335 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 RHOP08100 348 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 SPATA31D3P0C874 917 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 PROZP22891 400 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 KRT85P78386 507 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 SMARCB1Q12824 385 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 DMP1Q13316 513 aaPredicted RBP6.53□□□□□ -1.36
PTPRR-204ENST00000440835 PTPAQ15257 358 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 NT5DC1Q5TFE4 455 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 IQCEQ6IPM2 695 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 MPZL3Q6UWV2 235 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 SPATA31D4Q6ZUB0 917 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 CCDC186Q7Z3E2 898 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 CEP57Q86XR8 500 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 ACAP3Q96P50 834 aa6.53□□□□□ -1.36
PTPRR-204ENST00000440835 ARHGAP28Q9P2N2 729 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms