RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 EPHX3Q9H6B9 360 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 WDR6Q9NNW5 1121 aaKnown RBP11.32□□□□□ -0.6
MCF2L-216ENST00000439475 HSPBP1Q9NZL4 362 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 HOOK1Q9UJC3 728 aaKnown RBP11.32□□□□□ -0.6
MCF2L-216ENST00000439475 FBXL5Q9UKA1 691 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-216ENST00000439475 MAFFQ9ULX9 164 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 VWA8A3KMH1 1905 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 PLXNA3P51805 1871 aa11.32□□□□□ -0.6
MCF2L-216ENST00000439475 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 OR6C75A6NL08 312 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 CLIC2O15247 247 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 KLRC4O43908 158 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 PRPF40AO75400 957 aaKnown RBP11.31□□□□□ -0.6
MCF2L-216ENST00000439475 RFPL2O75678 378 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 OAZ2O95190 189 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 TNNC2P02585 160 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 LRG1P02750 347 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 RPN1P04843 607 aaKnown RBP11.31□□□□□ -0.6
MCF2L-216ENST00000439475 CPB1P15086 417 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 ANP32AP39687 249 aaKnown RBP11.31□□□□□ -0.6
MCF2L-216ENST00000439475 AARSP49588 968 aaKnown RBP eCLIP11.31□□□□□ -0.6
MCF2L-216ENST00000439475 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 RBP5P82980 135 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 ROR1Q01973 937 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 DUOXA2Q1HG44 320 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 BMT2Q1RMZ1 405 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 TMEM31Q5JXX7 168 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 OVOS1Q6IE37 1185 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 GRAMD1CQ8IYS0 662 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 RDH13Q8NBN7 331 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 CYP4F11Q9HBI6 524 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 AGPAT3Q9NRZ7 376 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 AFF4Q9UHB7 1163 aaKnown RBP11.31□□□□□ -0.6
MCF2L-216ENST00000439475 POLIQ9UNA4 740 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 AGAP1Q9UPQ3 857 aa11.31□□□□□ -0.6
MCF2L-216ENST00000439475 TRANK1O15050 2925 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 CYB561D2O14569 222 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 PRRG1O14668 218 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 ADAM12O43184 909 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 TGFB1I1O43294 461 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 CALUO43852 315 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-216ENST00000439475 TBC1D4O60343 1298 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 EXOC3O60645 756 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 ABLIM3O94929 683 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 PAPLNO95428 1278 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 KRT19P08727 400 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 POU2F2P09086 479 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 ATF2P15336 505 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 TNNI1P19237 187 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-216ENST00000439475 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-216ENST00000439475 CYP2J2P51589 502 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 STK4Q13043 487 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 C12orf56Q8IXR9 622 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 EFCAB13Q8IY85 973 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 ELMOD1Q8N336 334 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 CSGALNACT2Q8N6G5 542 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 SLC7A14Q8TBB6 771 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 PDE11AQ9HCR9 933 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.3□□□□□ -0.6
MCF2L-216ENST00000439475 MUTYHQ9UIF7 546 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 CDH22Q9UJ99 828 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 ITGA11Q9UKX5 1188 aa11.3□□□□□ -0.6
MCF2L-216ENST00000439475 TIMM13Q9Y5L4 95 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-216ENST00000439475 ZFP37Q9Y6Q3 630 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-216ENST00000439475 ANK1P16157 1881 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 WDR27A2RRH5 827 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 KPNA7A9QM74 516 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 C2CD4DB7Z1M9 353 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 PDXKO00764 312 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 GPR37L1O60883 481 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 RHOBTB3O94955 611 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 ITGB3P05106 788 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 CYP11A1P05108 521 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 PTPN2P17706 415 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 POLR2BP30876 1174 aaKnown RBP11.29□□□□□ -0.6
MCF2L-216ENST00000439475 HOXD13P35453 343 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 SMARCB1Q12824 385 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 MYO1EQ12965 1108 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 MYBPC2Q14324 1141 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 KCNB1Q14721 858 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 SNRNP35Q16560 246 aaKnown RBP11.29□□□□□ -0.6
MCF2L-216ENST00000439475 IQCEQ6IPM2 695 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 RSPO2Q6UXX9 243 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-216ENST00000439475 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-216ENST00000439475 CBWD2Q8IUF1 395 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 WDR49Q8IV35 697 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 LRRC52Q8N7C0 313 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 EDAQ92838 391 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 NXPE3Q969Y0 559 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 ZNF707Q96C28 371 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-216ENST00000439475 ZNF512Q96ME7 567 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-216ENST00000439475 GTPBP4Q9BZE4 634 aaKnown RBP11.29□□□□□ -0.6
MCF2L-216ENST00000439475 INTS13Q9NVM9 706 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 RMND1Q9NWS8 449 aa11.29□□□□□ -0.6
MCF2L-216ENST00000439475 IGSF9Q9P2J2 1179 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms