RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TYW1Q9NV66 732 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 CALCOCO1Q9P1Z2 691 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 KLHL42Q9P2K6 505 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 HSFX1Q9UBD0 423 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 RUVBL1Q9Y265 456 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 MRFAP1Q9Y605 127 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 AATKQ6ZMQ8 1374 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 POLR2AP24928 1970 aaKnown RBP4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 GLI2P10070 1586 aa4.36□□□□□ -1.71
HMGB3P12-201ENST00000438745 SHROOM2Q13796 1616 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 PRDM2Q13029 1718 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 CCDC154A6NI56 674 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 SLC43A1O75387 559 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 ERN1O75460 977 aaKnown RBP4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZFPL1O95159 310 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 GPANK1O95872 356 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 HMGB1P09429 215 aaKnown RBP4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 SBK3P0C264 359 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 CCND1P24385 295 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 HSD11B2P80365 405 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 MXRA7P84157 204 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 DSC2Q02487 901 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 IL10RAQ13651 578 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 RAB39AQ14964 217 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 ACAP2Q15057 778 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 PABPC1LQ4VXU2 614 aaKnown RBP4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 MIGA2Q7L4E1 593 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZNF575Q86XF7 245 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 PRIMA1Q86XR5 153 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 CMTR2Q8IYT2 770 aaKnown RBP4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 SUPT20HQ8NEM7 779 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 JDP2Q8WYK2 163 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 UNKLQ9H9P5 680 aaKnown RBP4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 AASDHPPTQ9NRN7 309 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 TDP1Q9NUW8 608 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 VSX1Q9NZR4 365 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 RNF181Q9P0P0 153 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 SERPINB13Q9UIV8 391 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 NOX1Q9Y5S8 564 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 PTPRTO14522 1441 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 ADAMTSL3P82987 1691 aa4.35□□□□□ -1.71
HMGB3P12-201ENST00000438745 XPOTO43592 962 aaKnown RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZRANB2O95218 330 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 MTHFD1P11586 935 aaKnown RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 BMP5P22003 454 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 CLK3P49761 638 aaKnown RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 VAV2P52735 878 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZNF280AP59817 542 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 CREMQ03060 361 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 TLE1Q04724 770 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 TTF1Q15361 905 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 ATP2B3Q16720 1220 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 PRR16Q569H4 304 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 EFCAB2Q5VUJ9 269 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 SP5Q6BEB4 398 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 PPP4R3AQ6IN85 833 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 ZBTB46Q86UZ6 589 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 PNMA8AQ86V59 439 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 LNX2Q8N448 690 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 NSUN6Q8TEA1 469 aaKnown RBP4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 SLC9A6Q92581 669 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 JKAMPQ9P055 326 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 USP25Q9UHP3 1055 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 SALL3Q9BXA9 1300 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 FGD5Q6ZNL6 1462 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 MADDQ8WXG6 1647 aa4.34□□□□□ -1.71
HMGB3P12-201ENST00000438745 PBRM1Q86U86 1689 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 CDHR4A6H8M9 788 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 KIAA0391O15091 583 aaKnown RBP4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 GRM6O15303 877 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 HAUS5O94927 633 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 ITGAMP11215 1152 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 NEK2P51955 445 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 KIF23Q02241 960 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 MPP3Q13368 585 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 FLYWCH1Q4VC44 716 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 UTP14CQ5TAP6 766 aaKnown RBP4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 FOXR2Q6PJQ5 311 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 TMPRSS9Q7Z410 1059 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 RSPH3Q86UC2 560 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 PRR18Q8N4B5 295 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 TBC1D15Q8TC07 691 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 HOOK2Q96ED9 719 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 TMX3Q96JJ7 454 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 CLPTM1LQ96KA5 538 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 Q96MF0 132 aa4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 THRAP3Q9Y2W1 955 aaKnown RBP4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 CFAP20Q9Y6A4 193 aaKnown RBP4.33□□□□□ -1.72
HMGB3P12-201ENST00000438745 CFAP43Q8NDM7 1665 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 LTBP4Q8N2S1 1624 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 KIAA0586Q9BVV6 1533 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 A0A1W2PS29 197 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZAR1LA6NP61 321 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 NT5C1B-RDH14C9J2C7 533 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 TOM1O60784 492 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 AGFG2O95081 481 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 RPLP2P05387 115 aaKnown RBP4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 FCER1AP12319 257 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms