RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SLC16A4O15374 487 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 ADAM12O43184 909 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 PAPLNO95428 1278 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 LMNAP02545 664 aaKnown RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 SNRPBP14678 240 aaKnown RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 CPB1P15086 417 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 U2AF2P26368 475 aaKnown RBP eCLIP8.48□□□□□ -1.056e-6■■■■□ 22.5
VPS50-204ENST00000438395 MARCKSP29966 332 aaPredicted RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 RPL9P32969 192 aaKnown RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 MCM4P33991 863 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 PRPHP41219 470 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 GPC5P78333 572 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 PRKCQQ04759 706 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 NOLC1Q14978 699 aaKnown RBP eCLIP8.48□□□□□ -1.05
VPS50-204ENST00000438395 NAB2Q15742 525 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 MLF2Q15773 248 aaPredicted RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 UPP1Q16831 310 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 CTXN3Q4LDR2 81 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 RILPL1Q5EBL4 403 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 IQCEQ6IPM2 695 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 ZNF280DQ6N043 979 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 PARM1Q6UWI2 310 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 MPZL3Q6UWV2 235 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 C1orf210Q8IVY1 113 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 NPAS3Q8IXF0 933 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 IGSF22Q8N9C0 903 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 APPL2Q8NEU8 664 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 PJA1Q8NG27 643 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 ITFG1Q8TB96 612 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 FGF14Q92915 247 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 SNX27Q96L92 541 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 ACO2Q99798 780 aaKnown RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 RUSC1Q9BVN2 902 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 TARS2Q9BW92 718 aaKnown RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 FOXQ1Q9C009 403 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 SPATA6Q9NWH7 488 aaPredicted RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 GDE1Q9NZC3 331 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 MRPS17Q9Y2R5 130 aaKnown RBP8.48□□□□□ -1.05
VPS50-204ENST00000438395 PCDHB6Q9Y5E3 794 aa8.48□□□□□ -1.05
VPS50-204ENST00000438395 GPR179Q6PRD1 2367 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 KANSL1LA0AUZ9 987 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 PP2D1A8MPX8 630 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 E9PMD0 336 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 ZNF197O14709 1029 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 NCAM2O15394 837 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 CLDN3O15551 220 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 LAMTOR5O43504 91 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 KINO60870 393 aaKnown RBP8.47□□□□□ -1.05
VPS50-204ENST00000438395 TOM1L1O75674 476 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 EDN1P05305 212 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 KRT18P05783 430 aaKnown RBP8.47□□□□□ -1.05
VPS50-204ENST00000438395 RHOP08100 348 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 KCNE1P15382 129 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 GUCY2CP25092 1073 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 MAGEA9P43362 315 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 BRCC3P46736 316 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 ROR1Q01973 937 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 RAD51AP2Q09MP3 1159 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 SNW1Q13573 536 aaKnown RBP8.47□□□□□ -1.05
VPS50-204ENST00000438395 RABEP1Q15276 862 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 ECM1Q16610 540 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 CYP4A22Q5TCH4 519 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 SLC8B1Q6J4K2 584 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 PDZD4Q76G19 769 aaPredicted RBP8.47□□□□□ -1.05
VPS50-204ENST00000438395 USP37Q86T82 979 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 CEP120Q8N960 986 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 ZNF461Q8TAF7 563 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 CORO1BQ9BR76 489 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 SLITRK6Q9H5Y7 841 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 CYP4F11Q9HBI6 524 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 HCFC1R1Q9NWW0 138 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 ARHGAP28Q9P2N2 729 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 R4GN57 208 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 ZNF292O60281 2723 aa8.47□□□□□ -1.05
VPS50-204ENST00000438395 TDRD15B5MCY1 1934 aaKnown RBP8.46□□□□□ -1.05
VPS50-204ENST00000438395 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.05
VPS50-204ENST00000438395 VWA3AA6NCI4 1184 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 SFI1A8K8P3 1242 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 HNRNPDLO14979 420 aaKnown RBP8.46□□□□□ -1.06
VPS50-204ENST00000438395 XPOTO43592 962 aaKnown RBP8.46□□□□□ -1.06
VPS50-204ENST00000438395 ECI2O75521 394 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 CLTAP09496 248 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 PLS3P13797 630 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 PTPN2P17706 415 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 CDC25AP30304 524 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 LIG4P49917 911 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 STARD6P59095 220 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 PPP2R3AQ06190 1150 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 KYAT1Q16773 422 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 TUSC1Q2TAM9 212 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 SLC44A4Q53GD3 710 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 ZBTB41Q5SVQ8 909 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 TPGS2Q68CL5 300 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 RINT1Q6NUQ1 792 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 RSPO2Q6UXX9 243 aaPredicted RBP8.46□□□□□ -1.06
VPS50-204ENST00000438395 ZPBP2Q6X784 338 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 TPRG1Q6ZUI0 275 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 DAW1Q8N136 415 aa8.46□□□□□ -1.06
VPS50-204ENST00000438395 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms