RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 SEMA4DQ92854 862 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 CPB2Q96IY4 423 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 GPATCH2LQ9NWQ4 482 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 TMEM237Q96Q45 408 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 POLIQ9UNA4 740 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 MYH3P11055 1940 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 RBAK-RBAKDNI3L0D1 243 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 STK10O94804 968 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 SERPINB6P35237 376 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 TMPRSS15P98073 1019 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 HAO1Q9UJM8 370 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 PCDHA2Q9Y5H9 948 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 CALB1P05937 261 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 KRT3P12035 628 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 STAT5BP51692 787 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 CERKQ8TCT0 537 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 DEFB129Q9H1M3 183 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 ABCF3Q9NUQ8 709 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 FAM49BQ9NUQ9 324 aa12.31□□□□□ -0.44
PDLIM5-206ENST00000437932 UBOX5O94941 541 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 ROR1Q01973 937 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 NFX1Q12986 1120 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 SREK1Q8WXA9 508 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 PIH1D1Q9NWS0 290 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 SKOR1P84550 965 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 RAPH1Q70E73 1250 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 RPAINQ86UA6 219 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 MRPL4Q9BYD3 311 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 NOD2Q9HC29 1040 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 DGAT1O75907 488 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 ITGB5P18084 799 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 RAD23BP54727 409 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 NME3Q13232 169 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 PCNX4Q63HM2 1172 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 C3orf62Q6ZUJ4 267 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 PPARGC1AQ9UBK2 798 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 CHD4Q14839 1912 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 COPEO14579 308 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 HES6Q96HZ4 224 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 ESRRAP11474 423 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 TCF7P36402 384 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 ITKQ08881 620 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 LY6KQ17RY6 165 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 KDELC2Q7Z4H8 507 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 SDCCAG8Q86SQ7 713 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 FEZF2Q8TBJ5 459 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 TRAPPC12Q8WVT3 735 aa12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 RANBP17Q9H2T7 1088 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-206ENST00000437932 TRAPPC3O43617 180 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 CST8O60676 142 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 KRT4P19013 534 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 TBXAS1P24557 533 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 CALRP27797 417 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 TNFRSF8P28908 595 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 SLC1A1P43005 524 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 SLC8A3P57103 927 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 ASTE1Q2TB18 679 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 CRY2Q49AN0 593 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 DCAF12L1Q5VU92 463 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 EPS8L1Q8TE68 723 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 MORC4Q8TE76 937 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 GTF3C4Q9UKN8 822 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 PCDHB2Q9Y5E7 798 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 SKAP2O75563 359 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 CTCFP49711 727 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 COBLL1Q53SF7 1204 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 C11orf63Q6NUN7 778 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 MCOLN2Q8IZK6 566 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 COL20A1Q9P218 1284 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 ARL2BPQ9Y2Y0 163 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 L3MBTL1Q9Y468 752 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 ENO1P06733 434 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 BAG6P46379 1132 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 JAM2P57087 298 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 AP1B1Q10567 949 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 RCOR2Q8IZ40 523 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 PRELID2Q8N945 189 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 HSD17B14Q9BPX1 270 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 YIPF3Q9GZM5 350 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 COL18A1P39060 1754 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 TULP2O00295 520 aa12.29□□□□□ -0.44
PDLIM5-206ENST00000437932 ANXA13P27216 316 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms