RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 C3orf58Q8NDZ4 430 aa16.46■□□□□ 0.23
NELFE-204ENST00000436289 DEPTORQ8TB45 409 aa16.46■□□□□ 0.23
NELFE-204ENST00000436289 SCNM1Q9BWG6 230 aa16.46■□□□□ 0.23
NELFE-204ENST00000436289 NCOA5Q9HCD5 579 aaKnown RBP16.46■□□□□ 0.23
NELFE-204ENST00000436289 GTSE1Q9NYZ3 720 aa16.46■□□□□ 0.23
NELFE-204ENST00000436289 NEUROG3Q9Y4Z2 214 aa16.46■□□□□ 0.23
NELFE-204ENST00000436289 ASB3Q9Y575 518 aa16.46■□□□□ 0.23
NELFE-204ENST00000436289 DSPP15924 2871 aaKnown RBP16.45■□□□□ 0.22
NELFE-204ENST00000436289 PODXLO00592 558 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 USO1O60763 962 aaKnown RBP16.45■□□□□ 0.22
NELFE-204ENST00000436289 CPA1P15085 419 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 GJA1P17302 382 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 ATP2B1P20020 1258 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 IGFBP6P24592 240 aaPredicted RBP16.45■□□□□ 0.22
NELFE-204ENST00000436289 MARCKSP29966 332 aaPredicted RBP16.45■□□□□ 0.22
NELFE-204ENST00000436289 NAMPTP43490 491 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 ITPRIPL2Q3MIP1 535 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 GLRA4Q5JXX5 417 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 ZCCHC14Q8WYQ9 949 aaKnown RBP16.45■□□□□ 0.22
NELFE-204ENST00000436289 CCDC94Q9BW85 323 aaPredicted RBP16.45■□□□□ 0.22
NELFE-204ENST00000436289 ZMYM5Q9UJ78 669 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 ARID2Q68CP9 1835 aa16.45■□□□□ 0.22
NELFE-204ENST00000436289 A0A1W2PRU2 124 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 BCLAF3A2AJT9 711 aaKnown RBP16.44■□□□□ 0.22
NELFE-204ENST00000436289 TTLL13PA6NNM8 815 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 GIPC1O14908 333 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 KHNYNO15037 678 aaKnown RBP16.44■□□□□ 0.22
NELFE-204ENST00000436289 RDXP35241 583 aaKnown RBP16.44■□□□□ 0.22
NELFE-204ENST00000436289 ALDH1A3P47895 512 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 CREB5Q02930 508 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 FBXO43Q4G163 708 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 ARHGAP15Q53QZ3 475 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 ALKAL1Q6UXT8 129 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 BEST2Q8NFU1 509 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 BPIFB1Q8TDL5 484 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 PIGOQ8TEQ8 1089 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 RSPRY1Q96DX4 576 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 SUSD3Q96L08 255 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 NACC1Q96RE7 527 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 LRRC3Q9BY71 257 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 CCDC113Q9H0I3 377 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 DUSP15Q9H1R2 295 aaPredicted RBP16.44■□□□□ 0.22
NELFE-204ENST00000436289 TMEM9BQ9NQ34 198 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 GPRC5CQ9NQ84 441 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 EBF1Q9UH73 591 aa16.44■□□□□ 0.22
NELFE-204ENST00000436289 TAF4O00268 1085 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 CPB1P15086 417 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 KCNE1P15382 129 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 PXNP49023 591 aaPredicted RBP16.43■□□□□ 0.22
NELFE-204ENST00000436289 TMEM196Q5HYL7 178 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 ATF7IP2Q5U623 682 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 PIK3AP1Q6ZUJ8 805 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 MAEAQ7L5Y9 396 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 ZNF274Q96GC6 653 aaPredicted RBP16.43■□□□□ 0.22
NELFE-204ENST00000436289 SMOC1Q9H4F8 434 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 TTC12Q9H892 705 aaPredicted RBP16.43■□□□□ 0.22
NELFE-204ENST00000436289 GOLGA2P5Q9HBQ8 144 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 MSRB2Q9Y3D2 182 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.43■□□□□ 0.22
NELFE-204ENST00000436289 NCANO14594 1321 aa16.43■□□□□ 0.22
NELFE-204ENST00000436289 PDCD11Q14690 1871 aaKnown RBP16.42■□□□□ 0.22
NELFE-204ENST00000436289 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
NELFE-204ENST00000436289 GRM5P41594 1212 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 EEF1DP3Q658K8 133 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 ITIH5Q86UX2 942 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 CCDC26Q8TAB7 109 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 DDX12PQ92771 950 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 SLC32A1Q9H598 525 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 TNFSF13BQ9Y275 285 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 YIPF1Q9Y548 306 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 LAMA1P25391 3075 aa16.42■□□□□ 0.22
NELFE-204ENST00000436289 LNP1A1A4G5 178 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 CDKL5O76039 1030 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 OAZ2O95190 189 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 CYP11B2P19099 503 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 SPINK2P20155 84 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 DRD1P21728 446 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 HSPA4P34932 840 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 MCM2P49736 904 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
NELFE-204ENST00000436289 CALCRLQ16602 461 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 TCEAL6Q6IPX3 200 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 RNF19BQ6ZMZ0 732 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 TMC8Q8IU68 726 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 TTC8Q8TAM2 541 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 TCEAL3Q969E4 200 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 ZFYVE19Q96K21 471 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 LRRC3BQ96PB8 259 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 ATXN3LQ9H3M9 355 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 TASP1Q9H6P5 420 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 HSFX1Q9UBD0 423 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 PCDHB8Q9UN66 801 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 SNX14Q9Y5W7 946 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 PHLPP2Q6ZVD8 1323 aa16.41■□□□□ 0.22
NELFE-204ENST00000436289 DMXL2Q8TDJ6 3036 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms