RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 GDF3Q9NR23 364 aa11.49□□□□□ -0.57
CCDC171-202ENST00000432954 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
CCDC171-202ENST00000432954 A0A087WZG4 1122 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 A6NJY4 79 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 H0YGN5 161 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 OPHN1O60890 802 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 GMNNO75496 209 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 JRKO75564 520 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ARIH2O95376 493 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 HPGDP15428 266 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 GSTM2P28161 218 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 SLC5A2P31639 672 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TAP1Q03518 808 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 FAPQ12884 760 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 STK3Q13188 491 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TRIM14Q14142 442 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 NFIL3Q16649 462 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 LSM12Q3MHD2 195 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 DCAF6Q58WW2 860 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 FAM205BPQ63HN1 556 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TAS1R3Q7RTX0 852 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 LRRC34Q8IZ02 419 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 EIF1ADQ8N9N8 165 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 LHFPL5Q8TAF8 219 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ZFRQ96KR1 1074 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 CFAP57Q96MR6 1250 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 C17orf80Q9BSJ5 609 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 CYP4F11Q9HBI6 524 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 MRM3Q9HC36 420 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 KIAA1586Q9HCI6 787 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 RCOR1Q9UKL0 485 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 NFS1Q9Y697 457 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 EPN1Q9Y6I3 576 aaPredicted RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ABCC6O95255 1503 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ABCC5O15440 1437 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ARHGEF5Q12774 1597 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 FAM172BPA6NC97 362 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 MAFO75444 373 aaPredicted RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 INMTO95050 263 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 KRT7P08729 469 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 FAM228BP0C875 321 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TSPY3P0CV98 308 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TSPY8P0CW00 308 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TSPY1Q01534 308 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ACY1Q03154 408 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 C2orf54Q08AI8 447 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 CSTF3Q12996 717 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 RESTQ13127 1097 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 SSPNQ14714 243 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ZNF792Q3KQV3 632 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 GALNT13Q8IUC8 556 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 REXO1Q8N1G1 1221 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TTC8Q8TAM2 541 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 SLC44A1Q8WWI5 657 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ATXN2LQ8WWM7 1075 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 CIDECQ96AQ7 238 aaPredicted RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TOE1Q96GM8 510 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 DPEP3Q9H4B8 488 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TLE6Q9H808 572 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 CD209Q9NNX6 404 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ZDHHC7Q9NXF8 308 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
CCDC171-202ENST00000432954 CNTN3Q9P232 1028 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 GNPTGQ9UJJ9 305 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 GMEB2Q9UKD1 530 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 MAGI2Q86UL8 1455 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 PTPRTO14522 1441 aa11.48□□□□□ -0.57
CCDC171-202ENST00000432954 ZC3H13Q5T200 1668 aaKnown RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 CCDC163A0A0D9SF12 145 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 A0A0G2JS52 829 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ATP6V1G2-DDX39BF2Z307 99 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 PDE2AO00408 941 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 RNASEH1O60930 286 aaKnown RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 SULT1C4O75897 302 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 GABBR2O75899 941 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 PCSK6P29122 969 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 KRT2P35908 639 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ASMTP46597 345 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 IFNAR2P48551 515 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 RGS7P49802 495 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 TFAP4Q01664 338 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 DSG1Q02413 1049 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 ZNF829Q3KNS6 432 aaPredicted RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 FAM209BQ5JX69 171 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 KBTBD2Q8IY47 623 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 LRRC47Q8N1G4 583 aaKnown RBP11.47□□□□□ -0.57
CCDC171-202ENST00000432954 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 C9orf16Q9BUW7 83 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 STARD7Q9NQZ5 370 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 CHST12Q9NRB3 414 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 GPRC5DQ9NZD1 345 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 MALT1Q9UDY8 824 aa11.47□□□□□ -0.57
CCDC171-202ENST00000432954 POU2F3Q9UKI9 436 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms