RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 E2F7Q96AV8 911 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 ZSWIM3Q96MP5 696 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 MMTAG2Q9BU76 263 aaKnown RBP16.23■□□□□ 0.19
PRKDC-203ENST00000432581 KCND2Q9NZV8 630 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 TUBGCP4Q9UGJ1 667 aa16.23■□□□□ 0.19
PRKDC-203ENST00000432581 PRR5-ARHGAP8B1AHC4 643 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 H0YCG3 227 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 M0QZQ0 153 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 ZNF263O14978 683 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 MOSPD3O75425 235 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 OAZ2O95190 189 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 SEC24BO95487 1268 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 CLTAP09496 248 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 MYL4P12829 197 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 CYP3A5P20815 502 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 LRPAP1P30533 357 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 CCR3P51677 355 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 MLLT6P55198 1093 aaPredicted RBP16.22■□□□□ 0.19
PRKDC-203ENST00000432581 ARHGAP8P85298 464 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 LMNB2Q03252 620 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
PRKDC-203ENST00000432581 KYAT1Q16773 422 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 HYIQ5T013 277 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 RNF19BQ6ZMZ0 732 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 MFSD6LQ8IWD5 586 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 BEST2Q8NFU1 509 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 MSANTD3Q96H12 275 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.22■□□□□ 0.19
PRKDC-203ENST00000432581 GMEB2Q9UKD1 530 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 YIPF1Q9Y548 306 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 PIAS3Q9Y6X2 628 aa16.22■□□□□ 0.19
PRKDC-203ENST00000432581 NRG2O14511 850 aaPredicted RBP16.21■□□□□ 0.19
PRKDC-203ENST00000432581 XPOTO43592 962 aaKnown RBP16.21■□□□□ 0.19
PRKDC-203ENST00000432581 CXCL8P10145 99 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 MATR3P43243 847 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKDC-203ENST00000432581 AARSP49588 968 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKDC-203ENST00000432581 RAD51AP2Q09MP3 1159 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 SEZ6Q53EL9 994 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 C1orf228Q6PIY5 440 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 USP37Q86T82 979 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 SYT2Q8N9I0 419 aaPredicted RBP16.21■□□□□ 0.19
PRKDC-203ENST00000432581 KIF12Q96FN5 646 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 TSPAN18Q96SJ8 248 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 SLITRK6Q9H5Y7 841 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 LARSQ9P2J5 1176 aaKnown RBP16.21■□□□□ 0.19
PRKDC-203ENST00000432581 RAB23Q9ULC3 237 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 UBQLN1Q9UMX0 589 aaKnown RBP16.21■□□□□ 0.19
PRKDC-203ENST00000432581 KIF3AQ9Y496 699 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 PATJQ8NI35 1801 aa16.21■□□□□ 0.19
PRKDC-203ENST00000432581 TTC26A0AVF1 554 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 OR6C75A6NL08 312 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 HEPACAM2A8MVW5 462 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 TDGF1P13385 188 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 SCP2P22307 547 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 VIPR2P41587 438 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 EPHB3P54753 998 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
PRKDC-203ENST00000432581 PPP2R3AQ06190 1150 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 TEAD2Q15562 447 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 RILPL1Q5EBL4 403 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 ERICH6BQ5W0A0 696 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 YAF2Q8IY57 180 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 SHKBP1Q8TBC3 707 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 CSGALNACT1Q8TDX6 532 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 KCNN1Q92952 543 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 BICD1Q96G01 975 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 LMAN1LQ9HAT1 526 aa16.2■□□□□ 0.18
PRKDC-203ENST00000432581 TRIP11Q15643 1979 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 ARNTLO00327 626 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 CHADO15335 359 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 PLA2G4BP0C869 781 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 GJA1P17302 382 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 ALDH1A3P47895 512 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 SLC12A3P55017 1021 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 NCKAP1LP55160 1127 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 GPR17Q13304 367 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 ZBTB6Q15916 424 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 DSTYKQ6XUX3 929 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 CELF5Q8N6W0 485 aaKnown RBP16.19■□□□□ 0.18
PRKDC-203ENST00000432581 PNMA5Q96PV4 448 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 C8orf33Q9H7E9 229 aaPredicted RBP16.19■□□□□ 0.18
PRKDC-203ENST00000432581 CDV3Q9UKY7 258 aaKnown RBP16.19■□□□□ 0.18
PRKDC-203ENST00000432581 USP18Q9UMW8 372 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 ASB3Q9Y575 518 aa16.19■□□□□ 0.18
PRKDC-203ENST00000432581 TIMM13Q9Y5L4 95 aaPredicted RBP16.19■□□□□ 0.18
PRKDC-203ENST00000432581 VNN2O95498 520 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 FGF19O95750 216 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 CHRNB1P11230 501 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 TYMPP19971 482 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 PAX3P23760 479 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 CCNE1P24864 410 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 CXCL12P48061 93 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 LIG4P49917 911 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 SPAG1Q07617 926 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 DUSP4Q13115 394 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 MYBPC2Q14324 1141 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 LRRC32Q14392 662 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 TMC8Q8IU68 726 aa16.18■□□□□ 0.18
PRKDC-203ENST00000432581 PGLYRP2Q96PD5 576 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms