RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ANKS6Q68DC2 871 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 COMMD2Q86X83 199 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 ANKRD27Q96NW4 1050 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 DDX47Q9H0S4 455 aaKnown RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 SMCO3A2RU48 225 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 CASP4P49662 377 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 CCNIQ14094 377 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 USP10Q14694 798 aaKnown RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 KBTBD12Q3ZCT8 623 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 SGO1Q5FBB7 561 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 CCT8L1PA6NM43 557 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 GNAT1P11488 350 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 PSMD4P55036 377 aaKnown RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 CROCCP3Q8IVE0 287 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 RASSF5Q8WWW0 418 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 JADE3Q92613 823 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 XPO7Q9UIA9 1087 aaKnown RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 MCM8Q9UJA3 840 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 PEX3P56589 373 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 RBBP8NLQ8NC74 664 aaPredicted RBP17.19■□□□□ 0.34
RIF1-204ENST00000430328 BEST2Q8NFU1 509 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 BTBD7Q9P203 1132 aa17.19■□□□□ 0.34
RIF1-204ENST00000430328 TRIM49BA6NDI0 452 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 TRPC5OSA6NMA1 111 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 SFI1A8K8P3 1242 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 TRIM49D1C9J1S8 452 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
RIF1-204ENST00000430328 DDHD2O94830 711 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 FNTAP49354 379 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 TTC39BQ5VTQ0 682 aaPredicted RBP17.18■□□□□ 0.34
RIF1-204ENST00000430328 LIN54Q6MZP7 749 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 PIDD1Q9HB75 910 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ZCCHC17Q9NP64 241 aaKnown RBP17.18■□□□□ 0.34
RIF1-204ENST00000430328 C8orf4Q9NR00 106 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 A8MXQ7 604 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 EXTL3O43909 919 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 CYFIP1Q7L576 1253 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 TTC39CQ8N584 583 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 PPP1R14BQ96C90 147 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 SLC25A13Q9UJS0 675 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 DYNC1LI2O43237 492 aaPredicted RBP17.18■□□□□ 0.34
RIF1-204ENST00000430328 LAYNQ6UX15 382 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 KIF2BQ8N4N8 673 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 USP33Q8TEY7 942 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 MAGED4Q96JG8 741 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 FHOD1Q9Y613 1164 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ESYT3A0FGR9 886 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 FBLN1P23142 703 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 OTOAQ7RTW8 1153 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 SIK2Q9H0K1 926 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 KIF14Q15058 1648 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 F8VZ95 297 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 hCG_1984214I3L0E3 225 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 CCDC166P0CW27 439 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ALOX15P16050 662 aaPredicted RBP17.18■□□□□ 0.34
RIF1-204ENST00000430328 C21orf59P57076 290 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 DDI2Q5TDH0 399 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ERAP2Q6P179 960 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 RAPGEF3O95398 923 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 FTLP02792 175 aaPredicted RBP17.18■□□□□ 0.34
RIF1-204ENST00000430328 LSP1P33241 339 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ATN1P54259 1190 aaPredicted RBP17.18■□□□□ 0.34
RIF1-204ENST00000430328 USP14P54578 494 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 UBXN2AP68543 259 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 P3H1Q32P28 736 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 PGBD2Q6P3X8 592 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 KCTD1Q719H9 257 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ATL2Q8NHH9 583 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 ZNF483Q8TF39 744 aaPredicted RBP17.18■□□□□ 0.34
RIF1-204ENST00000430328 RMI1Q9H9A7 625 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 RABGEF1Q9UJ41 708 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 YWHAQP27348 245 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 NPEPPSP55786 919 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 RFT1Q96AA3 541 aa17.18■□□□□ 0.34
RIF1-204ENST00000430328 TRAP1Q12931 704 aaKnown RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 RPS6KB2Q9UBS0 482 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 PNMA8BQ9ULN7 279 aaPredicted RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 FAM102AQ5T9C2 384 aaPredicted RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 NOD2Q9HC29 1040 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 POU1F1P28069 291 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 CDC16Q13042 620 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 ORC2Q13416 577 aaPredicted RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 PPP1R16BQ96T49 567 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 FAM192AQ9GZU8 254 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 CD209Q9NNX6 404 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 PCMTD2Q9NV79 361 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 SEMA3DO95025 777 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 NFICP08651 508 aa17.17■□□□□ 0.34
RIF1-204ENST00000430328 OASLQ15646 514 aaKnown RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 HIST2H2ACQ16777 129 aaPredicted RBP17.17■□□□□ 0.34
RIF1-204ENST00000430328 HIST2H2AA3Q6FI13 130 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms