RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 TIMM13Q9Y5L4 95 aaPredicted RBP18.4■□□□□ 0.54
UBE3D-204ENST00000430071 DENND4CQ5VZ89 1909 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 PVALEFA0A1B0GWK0 134 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 NRG2O14511 850 aaPredicted RBP18.39■□□□□ 0.53
UBE3D-204ENST00000430071 TRAPPC3O43617 180 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 SEC24AO95486 1093 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 MYL1P05976 194 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 ADSSP30520 456 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 MCM4P33991 863 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 WNT7BP56706 349 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 LIN9Q5TKA1 542 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 JADE1Q6IE81 842 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 CRELD2Q6UXH1 353 aaPredicted RBP18.39■□□□□ 0.53
UBE3D-204ENST00000430071 ITFG1Q8TB96 612 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 RPP25Q9BUL9 199 aaKnown RBP18.39■□□□□ 0.53
UBE3D-204ENST00000430071 ST6GALNAC4Q9H4F1 302 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 RPF1Q9H9Y2 349 aaKnown RBP18.39■□□□□ 0.53
UBE3D-204ENST00000430071 PLEKHA5Q9HAU0 1116 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 DNMT3BQ9UBC3 853 aaKnown RBP18.39■□□□□ 0.53
UBE3D-204ENST00000430071 FBXL5Q9UKA1 691 aa18.39■□□□□ 0.53
UBE3D-204ENST00000430071 CACNA1IQ9P0X4 2223 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
UBE3D-204ENST00000430071 NFICP08651 508 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 LRPAP1P30533 357 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 PPP2R3AQ06190 1150 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 SCARA3Q6AZY7 606 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 SLC8B1Q6J4K2 584 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 PDXDC1Q6P996 788 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 ELMSAN1Q6PJG2 1045 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 UBALD2Q8IYN6 164 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 GPT2Q8TD30 523 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 ERCC4Q92889 916 aaPredicted RBP18.38■□□□□ 0.53
UBE3D-204ENST00000430071 FAM84AQ96KN4 292 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
UBE3D-204ENST00000430071 EPS15L1Q9UBC2 864 aa18.38■□□□□ 0.53
UBE3D-204ENST00000430071 MIA3Q5JRA6 1907 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 SYN3O14994 580 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 ABLIM3O94929 683 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 HNRNPA1P09651 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBE3D-204ENST00000430071 LAMP2P13473 410 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 AVPR2P30518 371 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 TDGQ13569 410 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 KMT5BQ4FZB7 885 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 CTXN3Q4LDR2 81 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 FAM26FQ5R3K3 315 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 ELOA2Q8IYF1 753 aaPredicted RBP18.37■□□□□ 0.53
UBE3D-204ENST00000430071 UBQLN1Q9UMX0 589 aaKnown RBP18.37■□□□□ 0.53
UBE3D-204ENST00000430071 STYXL1Q9Y6J8 313 aa18.37■□□□□ 0.53
UBE3D-204ENST00000430071 ZNF638Q14966 1978 aaKnown RBP18.37■□□□□ 0.53
UBE3D-204ENST00000430071 SPTLC1O15269 473 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 GCNT3O95395 438 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 VNN2O95498 520 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 OR4Q2P0C623 313 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 FSHRP23945 695 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 CDR1P51861 262 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 NHLH1Q02575 133 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 SUGP1Q8IWZ8 645 aaKnown RBP18.36■□□□□ 0.53
UBE3D-204ENST00000430071 SLC44A3Q8N4M1 653 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 ZNF461Q8TAF7 563 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 CCDC34Q96HJ3 373 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 PHOX2BQ99453 314 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 EXOC1Q9NV70 894 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 AGO2Q9UKV8 859 aaKnown RBP18.36■□□□□ 0.53
UBE3D-204ENST00000430071 PCDHB8Q9UN66 801 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
UBE3D-204ENST00000430071 M0QZQ0 153 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 SCP2P22307 547 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 HOXA9P31269 272 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 AARSP49588 968 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBE3D-204ENST00000430071 TCF15Q12870 199 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 SLC5A9Q2M3M2 681 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 SPATA1Q5VX52 437 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 RNF19BQ6ZMZ0 732 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 EPM2AIP1Q7L775 607 aaPredicted RBP18.35■□□□□ 0.53
UBE3D-204ENST00000430071 TMEM105Q8N8V8 129 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 SPATA20Q8TB22 786 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 ING5Q8WYH8 240 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 FGF14Q92915 247 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 IGSF9Q9P2J2 1179 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 PCDHA5Q9Y5H7 936 aa18.35■□□□□ 0.53
UBE3D-204ENST00000430071 PRPF6O94906 941 aaKnown RBP18.34■□□□□ 0.53
UBE3D-204ENST00000430071 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 CFHP08603 1231 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 NPR3P17342 541 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 CYP3A5P20815 502 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 STK4Q13043 487 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 HTR4Q13639 388 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 CAMK4Q16566 473 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 L1TD1Q5T7N2 865 aaKnown RBP18.34■□□□□ 0.53
UBE3D-204ENST00000430071 PARM1Q6UWI2 310 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 EFCAB13Q8IY85 973 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 FGF13Q92913 245 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 HVCN1Q96D96 273 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 SAAL1Q96ER3 474 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 TMEM209Q96SK2 561 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 SLC39A2Q9NP94 309 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.34■□□□□ 0.53
UBE3D-204ENST00000430071 PCDHB13Q9Y5F0 798 aa18.34■□□□□ 0.53
UBE3D-204ENST00000430071 KRBA1A5PL33 1030 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms