RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 DENND2DQ9H6A0 471 aaPredicted RBP15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 F5H6K3 240 aa15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 EIF3FO00303 357 aaPredicted RBP15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 GRIN3BO60391 1043 aa15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 GAS8O95995 478 aa15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 KLRC3Q07444 240 aa15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 SLC29A2Q14542 456 aa15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 NSMFQ6X4W1 530 aa15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 ICA1LQ8NDH6 482 aa15.21■□□□□ 0.03
SYNGAP1-203ENST00000428982 MAGEB3O15480 346 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 IL17AQ16552 155 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 COA7Q96BR5 231 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 PGM2Q96G03 612 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 PABPC3Q9H361 631 aaKnown RBP15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 SEMA6BQ9H3T3 888 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 NYAP2Q9P242 653 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 CCPG1Q9ULG6 757 aa15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 RBMX2Q9Y388 322 aaKnown RBP15.21■□□□□ 0.02
SYNGAP1-203ENST00000428982 SFI1A8K8P3 1242 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 KRT4P19013 534 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 MMP13P45452 471 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 IREB2P48200 963 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 ZNF572Q7Z3I7 529 aaPredicted RBP15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 UBE2Q1Q7Z7E8 422 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 KIAA1683Q9H0B3 1180 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 CPVLQ9H3G5 476 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 SEL1LQ9UBV2 794 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 TACC3Q9Y6A5 838 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 TUBA1BP68363 451 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 TUBA1AQ71U36 451 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 SAMD7Q7Z3H4 446 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 SNX27Q96L92 541 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 WRNIP1Q96S55 665 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 CENPOQ9BU64 300 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 GCNT3O95395 438 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 CBX6O95503 412 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 ALAS1P13196 640 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 KRT15P19012 456 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 RHBDL3P58872 404 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 SLC2A7Q6PXP3 512 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 EXOC3L1Q86VI1 746 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 THAP11Q96EK4 314 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 PLGRKTQ9HBL7 147 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
SYNGAP1-203ENST00000428982 XPOTO43592 962 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 BTG3Q14201 252 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 RNF43Q68DV7 783 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 OLFML3Q9NRN5 406 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 AIPL1Q9NZN9 384 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 SIK3Q9Y2K2 1263 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 PITPNM2Q9BZ72 1349 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 WDR91A4D1P6 747 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 POLR2MP0CAP2 368 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ESRRGP62508 458 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 KCNH2Q12809 1159 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 LPIN1Q14693 890 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 IDI2Q9BXS1 227 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 TMEM39BQ9GZU3 492 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ZBTB5O15062 677 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ESRRBO95718 433 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 PLEKP08567 350 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ARFIP2P53365 341 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 GRB10Q13322 594 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 NDUFA5Q16718 116 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 SRRM1Q8IYB3 904 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 UPF1Q92900 1129 aaKnown RBP eCLIP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 N6AMT1Q9Y5N5 214 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 FAM187AA6NFU0 413 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ACSL3O95573 720 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 MRPS9P82933 396 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ANGEL2Q5VTE6 544 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 RSPH3Q86UC2 560 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 SATL1Q86VE3 508 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 KCTD17Q8N5Z5 321 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ANKRD36BP1Q96IX9 119 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 ATAD3AQ9NVI7 634 aa15.19■□□□□ 0.02
SYNGAP1-203ENST00000428982 DDHD2O94830 711 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 PSMC2P35998 433 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 ATP1A4Q13733 1029 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 NPY5RQ15761 445 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 CNGA2Q16280 664 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 KHDC1Q4VXA5 237 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 RGS9BPQ6ZS82 235 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 MCF2L2Q86YR7 1114 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 CLEC10AQ8IUN9 316 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 NKX2-3Q8TAU0 364 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 TTYH3Q9C0H2 523 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 ANLNQ9NQW6 1124 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 POTEMA6NI47 508 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 RPL5P46777 297 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 KLHDC7AQ5VTJ3 777 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 CCDC105Q8IYK2 499 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 ENDOVQ8N8Q3 282 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 CALML6Q8TD86 181 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms