RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 TRIB2Q92519 343 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 PAIP2Q9BPZ3 127 aaKnown RBP11.71□□□□□ -0.53
HIPK2-203ENST00000428878 C10orf88Q9H8K7 445 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 GPATCH2LQ9NWQ4 482 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 EFCAB8A8MWE9 144 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 ADCY6O43306 1168 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.53
HIPK2-203ENST00000428878 RNF8O76064 485 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
HIPK2-203ENST00000428878 CLTAP09496 248 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 GGCXP38435 758 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 VSNL1P62760 191 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 PAK2Q13177 524 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 TMEM35BQ8NCS4 154 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 PPTC7Q8NI37 304 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 HDAC7Q8WUI4 952 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 TRIM51Q9BSJ1 452 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 PLVAPQ9BX97 442 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 ARHGAP28Q9P2N2 729 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 TUBGCP4Q9UGJ1 667 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 SSC5DA1L4H1 1573 aa11.71□□□□□ -0.53
HIPK2-203ENST00000428878 FRMD3A2A2Y4 597 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 ITGA4P13612 1032 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 KRT10P13645 584 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 ACTN2P35609 894 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 SLCO1A2P46721 670 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 MARCKSL1P49006 195 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 PTENP60484 403 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 ZNF792Q3KQV3 632 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 NME8Q8N427 588 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 BHMTQ93088 406 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 IQCDQ96DY2 449 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 FIZ1Q96SL8 496 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 ADAM2Q99965 735 aa11.71□□□□□ -0.54
HIPK2-203ENST00000428878 KBTBD13C9JR72 458 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 GTF2F1P35269 517 aaKnown RBP eCLIP11.7□□□□□ -0.541e-10■■■■■ 40.3
HIPK2-203ENST00000428878 MAP9Q49MG5 647 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 SAMD3Q8N6K7 520 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 MSANTD4Q8NCY6 345 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 STKLD1Q8NE28 680 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 NDRG1Q92597 394 aaKnown RBP11.7□□□□□ -0.54
HIPK2-203ENST00000428878 SIK2Q9H0K1 926 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 PPEF2O14830 753 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 DNAJB2P25686 324 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 RFX6Q8HWS3 928 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 ADAM32Q8TC27 787 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 RIN2Q8WYP3 895 aaPredicted RBP11.7□□□□□ -0.54
HIPK2-203ENST00000428878 CGRRF1Q99675 332 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 RRN3P2A6NIE6 340 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 MEIS3P2A8K0S8 358 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 CA12O43570 354 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 MUTP22033 750 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 ARL2P36404 184 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 ADCY8P40145 1251 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 NDST1P52848 882 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 RBP5P82980 135 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 IRF2BP2Q7Z5L9 587 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 ZC3H18Q86VM9 953 aaKnown RBP11.7□□□□□ -0.54
HIPK2-203ENST00000428878 RFFLQ8WZ73 363 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 ST3GAL5Q9UNP4 418 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 GOLGA4Q13439 2230 aaKnown RBP11.7□□□□□ -0.54
HIPK2-203ENST00000428878 MYH11P35749 1972 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
HIPK2-203ENST00000428878 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PGRMC1O00264 195 aaKnown RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ASAP2O43150 1006 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 HMBSP08397 361 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 IQCF3P0C7M6 154 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ICAM3P32942 547 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SPATA4Q8NEY3 305 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ZNF606Q8WXB4 792 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SNX12Q9UMY4 172 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ATP8A1Q9Y2Q0 1164 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 A0A0B4J269 797 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PDE2AO00408 941 aaPredicted RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 LYPLA2O95372 231 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 C22orf31O95567 290 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 CALCOCO2Q13137 446 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 CCDC142Q17RM4 750 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 C10orf76Q5T2E6 689 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 CCDC62Q6P9F0 684 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PPP1R21Q6ZMI0 780 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PLPPR4Q7Z2D5 763 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SHCBP1Q8NEM2 672 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 KRT35Q92764 455 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PCDHB18PQ96TA0 734 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 KATNAL1Q9BW62 490 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 HMX1Q9NP08 348 aaPredicted RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 UTP11Q9Y3A2 253 aaKnown RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 NOC2LQ9Y3T9 749 aaKnown RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 A0A1W2PQJ5 194 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms