RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 KREMEN1Q96MU8 473 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 IP6K2Q9UHH9 426 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 ENTPD5O75356 428 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 ARP10275 920 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 PIK3CAP42336 1068 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 BBS9Q3SYG4 887 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 C12orf56Q8IXR9 622 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 SP8Q8IXZ3 490 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 LMO3Q8TAP4 145 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 ZNF398Q8TD17 642 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 TAS1R2Q8TE23 839 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 ZNF75CPQ92670 426 aaPredicted RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 TSSK1BQ9BXA7 367 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 KIAA1586Q9HCI6 787 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 SCN7AQ01118 1682 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 IQANK1A0A1B0GTG1 560 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 DENND3A2RUS2 1198 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 PI4K2BG5E9Z4 385 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 DNALI1O14645 258 aaPredicted RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 ASMTLO95671 621 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 THEMIS2Q5TEJ8 643 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 SNX30Q5VWJ9 437 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 PSPC1Q8WXF1 523 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 FGD4Q96M96 766 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 CRAMP1Q96RY5 1269 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 HEY2Q9UBP5 337 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 MTO1Q9Y2Z2 717 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 GOLGA8SH3BPF8 625 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 GOLGA8MH3BSY2 632 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 CAPN9O14815 690 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 PRPF4O43172 522 aaKnown RBP eCLIP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 BAG2O95816 211 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 CCNG1P51959 295 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 GEMIN4P57678 1058 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 PASD1Q8IV76 773 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 TRIM42Q8IWZ5 723 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 DTX3LQ8TDB6 740 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 DHX38Q92620 1227 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 VCX3BQ9H321 246 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 VCX3AQ9NNX9 186 aa11.37□□□□□ -0.59
ATP2C1-204ENST00000428331 C2CD2LO14523 706 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 PEX11AO75192 247 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 RPA3P35244 121 aaPredicted RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 SIX1Q15475 284 aaPredicted RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 ANKMY2Q8IV38 441 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 CCDC110Q8TBZ0 833 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 HAUS1Q96CS2 278 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 DPPA5A6NC42 116 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 KCNA3P22001 575 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 PGM1P36871 562 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 MFN1Q8IWA4 741 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 PARD3BQ8TEW8 1205 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 SH3TC2Q8TF17 1288 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 CRYGNQ8WXF5 182 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 TTC17Q96AE7 1141 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 CSRNP1Q96S65 589 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 SH2D3AQ9BRG2 576 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 RANBP17Q9H2T7 1088 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 SYNCQ9H7C4 482 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 MANSC1Q9H8J5 431 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 PARVAQ9NVD7 372 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 R3HDM2Q9Y2K5 976 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 IGLV3-22A0A075B6J6 115 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 LIG4P49917 911 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 SH3BGRP55822 239 aaPredicted RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 DNAJC24Q6P3W2 148 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 CTAGE3PQ8IX95 158 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 MXRA8Q9BRK3 442 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 BTBD10Q9BSF8 475 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 NKX1-2Q9UD57 310 aaPredicted RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 ZHX2Q9Y6X8 837 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 H0YCG3 227 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 PECAM1P16284 738 aaPredicted RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 YWHABP31946 246 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 GPC3P51654 580 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 OVGP1Q12889 678 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 LBRQ14739 615 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 ASAP3Q8TDY4 903 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 RILPQ96NA2 401 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 KCNQ5Q9NR82 932 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 KCNG1Q9UIX4 513 aa11.36□□□□□ -0.59
ATP2C1-204ENST00000428331 MAGEA13PA6NCF6 341 aa11.35□□□□□ -0.59
ATP2C1-204ENST00000428331 LPXNO60711 386 aa11.35□□□□□ -0.59
ATP2C1-204ENST00000428331 SLURP2P0DP57 97 aa11.35□□□□□ -0.59
ATP2C1-204ENST00000428331 MYCLP12524 364 aaPredicted RBP11.35□□□□□ -0.59
ATP2C1-204ENST00000428331 GTF2H1P32780 548 aa11.35□□□□□ -0.59
ATP2C1-204ENST00000428331 DYNC1I2Q13409 638 aaKnown RBP11.35□□□□□ -0.59
ATP2C1-204ENST00000428331 C2CD6Q53TS8 623 aa11.35□□□□□ -0.59
ATP2C1-204ENST00000428331 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms