RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 GLRA4Q5JXX5 417 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 LARP1BQ659C4 914 aaKnown RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 TPGS2Q68CL5 300 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 RNF19BQ6ZMZ0 732 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 ELMOD1Q8N336 334 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 LEMD2Q8NC56 503 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 PDZD7Q9H5P4 517 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
DDX39B-208ENST00000428098 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 TMEM74BQ9NUR3 256 aa13.13□□□□□ -0.31
DDX39B-208ENST00000428098 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 H0Y626 953 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 SLC37A4O43826 429 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 TRIM16O95361 564 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 PRAMEF12O95522 483 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 APBB3O95704 486 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 EDN1P05305 212 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.312e-13■■■□□ 16.4
DDX39B-208ENST00000428098 DGKEP52429 567 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 GRSF1Q12849 480 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDX39B-208ENST00000428098 PPP2R5CQ13362 524 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
DDX39B-208ENST00000428098 KARSQ15046 597 aaKnown RBP13.12□□□□□ -0.31
DDX39B-208ENST00000428098 TRIM61Q5EBN2 209 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 CCNI2Q6ZMN8 369 aaPredicted RBP13.12□□□□□ -0.31
DDX39B-208ENST00000428098 SYT13Q7L8C5 426 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 CYP2U1Q7Z449 544 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 FAM83CQ9BQN1 747 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 LXNQ9BS40 222 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 CRISPLD1Q9H336 500 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 FZD8Q9H461 694 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
DDX39B-208ENST00000428098 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
DDX39B-208ENST00000428098 GDAQ9Y2T3 454 aa13.12□□□□□ -0.31
DDX39B-208ENST00000428098 ANTXRLA6NF34 631 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 DPYSL4O14531 572 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 DKC1O60832 514 aaKnown RBP eCLIP13.11□□□□□ -0.315e-19■■□□□ 13.7
DDX39B-208ENST00000428098 PLA2G2AP14555 144 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 ENGP17813 658 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 PI4KAP42356 2102 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-208ENST00000428098 DMC1Q14565 340 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 EEF1DP3Q658K8 133 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 HAUS6Q7Z4H7 955 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 LURAP1LQ8IV03 231 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 RPLP0P6Q8NHW5 317 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 BPIFB1Q8TDL5 484 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 DYDC2Q96IM9 177 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
DDX39B-208ENST00000428098 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-208ENST00000428098 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 OBP2AQ9NY56 170 aa13.11□□□□□ -0.31
DDX39B-208ENST00000428098 A0A087WWV3 80 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 SLITRK3O94933 977 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 LMAN2Q12907 356 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 EPHA7Q15375 998 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 CTXN3Q4LDR2 81 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 TRIM68Q6AZZ1 485 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 PNPLA1Q8N8W4 532 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 POLR3CQ9BUI4 534 aaPredicted RBP13.1□□□□□ -0.31
DDX39B-208ENST00000428098 YIPF1Q9Y548 306 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 TRIP11Q15643 1979 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 SHROOM3Q8TF72 1996 aa13.1□□□□□ -0.31
DDX39B-208ENST00000428098 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 H7C4K7 107 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 M0R2N6 131 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 CD59P13987 128 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 CYP4A11Q02928 519 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 RUNX3Q13761 415 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 ZNF423Q2M1K9 1284 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
DDX39B-208ENST00000428098 GPR158Q5T848 1215 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 TPH2Q8IWU9 490 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 FRMD1Q8N878 549 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 HAS1Q92839 578 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 UROC1Q96N76 676 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 ATXN3LQ9H3M9 355 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 ZSWIM4Q9H7M6 989 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms