RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 TRIM43Q96BQ3 446 aaPredicted RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 FAM81BQ96LP2 452 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 CCDC42Q96M95 316 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 SDCBP2Q9H190 292 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 ACP6Q9NPH0 428 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 PPP2R2CQ9Y2T4 447 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 REXO2Q9Y3B8 237 aaKnown RBP12.94□□□□□ -0.34
RFC4-206ENST00000427785 PCDHB4Q9Y5E5 795 aa12.94□□□□□ -0.34
RFC4-206ENST00000427785 SSU72P8A0A1W2PR75 194 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 CASTOR2A6NHX0 329 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 AKR1B10O60218 316 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 POMCP01189 267 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 WEE2P0C1S8 567 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 ITGB8P26012 769 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 ATICP31939 592 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 GATMP50440 423 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 TNNC1P63316 161 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 GFPT1Q06210 699 aaPredicted RBP12.93□□□□□ -0.34
RFC4-206ENST00000427785 GRIK3Q13003 919 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 NAB2Q15742 525 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 TAF3Q5VWG9 929 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 TMEM270Q6UE05 265 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 UBE2Q1Q7Z7E8 422 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 CCDC170Q8IYT3 715 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 LNX1Q8TBB1 728 aaPredicted RBP12.93□□□□□ -0.34
RFC4-206ENST00000427785 EPS8L1Q8TE68 723 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 PPP1R13BQ96KQ4 1090 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 ZNF560Q96MR9 790 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 TSPAN18Q96SJ8 248 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.93□□□□□ -0.34
RFC4-206ENST00000427785 BCO2Q9BYV7 579 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 SLC38A7Q9NVC3 462 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 HMGXB4Q9UGU5 601 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
RFC4-206ENST00000427785 PTPRDP23468 1912 aa12.93□□□□□ -0.34
RFC4-206ENST00000427785 EIF3CLB5ME19 914 aaKnown RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 ZNF263O14978 683 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 KIAA0355O15063 1070 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 PARNO95453 639 aaKnown RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 STAU1O95793 577 aaKnown RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 THP07101 528 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 CCDC175P0C221 793 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 CYP3A5P20815 502 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 CLCN1P35523 988 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 PDE6CP51160 858 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 CYP27A1Q02318 531 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 ORC1Q13415 861 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 ASTE1Q2TB18 679 aaPredicted RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 NOP9Q86U38 636 aaKnown RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 SLC47A2Q86VL8 602 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 FMNL3Q8IVF7 1028 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 LRRC52Q8N7C0 313 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 RABGGTAQ92696 567 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 VWCEQ96DN2 955 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 EIF3CQ99613 913 aaKnown RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 SYT11Q9BT88 431 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 VRTNQ9H8Y1 702 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 CISHQ9NSE2 258 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 SEPT11Q9NVA2 429 aaKnown RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 TMEM161AQ9NX61 479 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 NOCTQ9UK39 431 aaKnown RBP12.92□□□□□ -0.34
RFC4-206ENST00000427785 TFR2Q9UP52 801 aa12.92□□□□□ -0.34
RFC4-206ENST00000427785 NLRC5Q86WI3 1866 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 GBF1Q92538 1859 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 A0A087X0T9 212 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.91□□□□□ -0.34
RFC4-206ENST00000427785 DDX3XO00571 662 aaKnown RBP eCLIP12.91□□□□□ -0.341e-12■□□□□ 9.8
RFC4-206ENST00000427785 PODXLO00592 558 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 PIRO00625 290 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 ENPP3O14638 875 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 SPTLC1O15269 473 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 B4GALT3O60512 393 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 OFD1O75665 1012 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 IPO7O95373 1038 aaKnown RBP12.91□□□□□ -0.34
RFC4-206ENST00000427785 CCDC172P0C7W6 258 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 FAM228BP0C875 321 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 P4HA1P13674 534 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 RAG1P15918 1043 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 CAPN2P17655 700 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 LRPAP1P30533 357 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 TAF6P49848 677 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 ZNF132P52740 706 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 CDH8P55286 799 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 YWHAEP62258 255 aaKnown RBP12.91□□□□□ -0.34
RFC4-206ENST00000427785 SV2CQ496J9 727 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 ZNF394Q53GI3 561 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 CNKSR3Q6P9H4 555 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 KIAA1328Q86T90 577 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 PALB2Q86YC2 1186 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 GLYCTKQ8IVS8 523 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 RPUSD2Q8IZ73 545 aaKnown RBP12.91□□□□□ -0.34
RFC4-206ENST00000427785 URGCPQ8TCY9 931 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 MMS19Q96T76 1030 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 PAAF1Q9BRP4 392 aa12.91□□□□□ -0.34
RFC4-206ENST00000427785 UBN1Q9NPG3 1134 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms