RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 ACO1P21399 889 aaKnown RBP15.18■□□□□ 0.02
LIG1-202ENST00000427526 WNT7BP56706 349 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 DAB2IPQ5VWQ8 1189 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 TRPM8Q7Z2W7 1104 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
LIG1-202ENST00000427526 EXTL3O43909 919 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 GSCP56915 257 aaPredicted RBP15.18■□□□□ 0.02
LIG1-202ENST00000427526 BPIFB4P59827 614 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 PSMD6Q15008 389 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 MCPH1Q8NEM0 835 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 JPH1Q9HDC5 661 aaPredicted RBP15.18■□□□□ 0.02
LIG1-202ENST00000427526 CTNNAL1Q9UBT7 734 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 ANAPC5Q9UJX4 755 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 ARID2Q68CP9 1835 aa15.18■□□□□ 0.02
LIG1-202ENST00000427526 SPATA31C2B4DYI2 1134 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 CFHP08603 1231 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 RALAP11233 206 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 NSFP46459 744 aaKnown RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 SF3A3Q12874 501 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■■■■□ 21
LIG1-202ENST00000427526 LRRC14Q15048 493 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 SNCBQ16143 134 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 CCNG2Q16589 344 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 MAGEC3Q8TD91 643 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 ATP6V0A1Q93050 837 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 NSRP1Q9H0G5 558 aaKnown RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 NINJ2Q9NZG7 142 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 ATF2P15336 505 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 ATP5DP30049 168 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 ADCY8P40145 1251 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 MPP2Q14168 576 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 TDRD10Q5VZ19 366 aaKnown RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 LMBRD2Q68DH5 695 aaPredicted RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 RELL1Q8IUW5 271 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 CCDC50Q8IVM0 306 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 CCDC60Q8IWA6 550 aaPredicted RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 PWWP2AQ96N64 755 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 HEMGNQ9BXL5 484 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 KIAA1586Q9HCI6 787 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 SLC9A2Q9UBY0 812 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 TPX2Q9ULW0 747 aaKnown RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 STYXL1Q9Y6J8 313 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 FOXO6A8MYZ6 492 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 PSTPIP1O43586 416 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 HLA-DRAP01903 254 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 TAS2R40P59535 323 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 ACTR2P61160 394 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 ELF3P78545 371 aaPredicted RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 CCDC91Q7Z6B0 441 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 ANKS1BQ7Z6G8 1248 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 BICD1Q96G01 975 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 CXorf56Q9H5V9 222 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 CYP26B1Q9NR63 512 aa15.17■□□□□ 0.02
LIG1-202ENST00000427526 DNAJC17Q9NVM6 304 aaKnown RBP15.17■□□□□ 0.02
LIG1-202ENST00000427526 VNN1O95497 513 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 IREB2P48200 963 aaKnown RBP15.16■□□□□ 0.02
LIG1-202ENST00000427526 MAMLD1Q13495 774 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 TTLL12Q14166 644 aaPredicted RBP15.16■□□□□ 0.02
LIG1-202ENST00000427526 NBPF20Q3BBV1 942 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 SEPT14Q6ZU15 432 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 RHOT1Q8IXI2 618 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 KATNAL2Q8IYT4 538 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 CYP4X1Q8N118 509 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 CHST13Q8NET6 341 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 SCLT1Q96NL6 688 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 LGALS13Q9UHV8 139 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 PTPRJQ12913 1337 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 TCP11X1B4DZS4 312 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 THAP12O43422 761 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 DKC1O60832 514 aaKnown RBP eCLIP15.16■□□□□ 0.021e-6■■□□□ 12.5
LIG1-202ENST00000427526 CETPP11597 493 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 NOMO3P69849 1222 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 WLSQ5T9L3 541 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 SPOPLQ6IQ16 392 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 CRELD2Q6UXH1 353 aaPredicted RBP15.16■□□□□ 0.02
LIG1-202ENST00000427526 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
LIG1-202ENST00000427526 CKAP2Q8WWK9 683 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 VCPIP1Q96JH7 1222 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 ABCF3Q9NUQ8 709 aa15.16■□□□□ 0.02
LIG1-202ENST00000427526 PSAPP07602 524 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 NLRP11P59045 1033 aaKnown RBP15.15■□□□□ 0.02
LIG1-202ENST00000427526 STXBP2Q15833 593 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 GNPTABQ3T906 1256 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 PLEKHA7Q6IQ23 1121 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 ABHD15Q6UXT9 468 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 NCAPG2Q86XI2 1143 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 ABRAQ8N0Z2 381 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 MGARPQ8TDB4 240 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 CDCA5Q96FF9 252 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 IFT74Q96LB3 600 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 HAPLN2Q9GZV7 340 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 POLR3FQ9H1D9 316 aaPredicted RBP15.15■□□□□ 0.02
LIG1-202ENST00000427526 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 APOBEC3GQ9HC16 384 aaKnown RBP15.15■□□□□ 0.02
LIG1-202ENST00000427526 FGFR1OP2Q9NVK5 253 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 CNTN6Q9UQ52 1028 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 USP15Q9Y4E8 981 aaPredicted RBP15.15■□□□□ 0.02
LIG1-202ENST00000427526 TNNI1P19237 187 aa15.15■□□□□ 0.02
LIG1-202ENST00000427526 KLRC2P26717 231 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms