RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 KCNA10Q16322 511 aa15.41■□□□□ 0.06
CDK3-201ENST00000425876 GDF6Q6KF10 455 aaPredicted RBP15.41■□□□□ 0.06
CDK3-201ENST00000425876 ALKAL1Q6UXT8 129 aa15.41■□□□□ 0.06
CDK3-201ENST00000425876 EIF2AQ9BY44 585 aaKnown RBP15.41■□□□□ 0.06
CDK3-201ENST00000425876 OSGEPQ9NPF4 335 aa15.41■□□□□ 0.06
CDK3-201ENST00000425876 AVENQ9NQS1 362 aaPredicted RBP15.41■□□□□ 0.06
CDK3-201ENST00000425876 DPP3Q9NY33 737 aa15.41■□□□□ 0.06
CDK3-201ENST00000425876 UVRAGQ9P2Y5 699 aa15.41■□□□□ 0.06
CDK3-201ENST00000425876 STXBP5LQ9Y2K9 1186 aa15.41■□□□□ 0.06
CDK3-201ENST00000425876 TRPV2Q9Y5S1 764 aa15.41■□□□□ 0.06
CDK3-201ENST00000425876 CITO14578 2027 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 HTTP42858 3142 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 BUB1BO60566 1050 aaPredicted RBP15.4■□□□□ 0.06
CDK3-201ENST00000425876 FKTNO75072 461 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 CABYRO75952 493 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 CLSTN1O94985 981 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 KIF4AO95239 1232 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 TFRCP02786 760 aaKnown RBP15.4■□□□□ 0.06
CDK3-201ENST00000425876 ASGR1P07306 291 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 KRT19P08727 400 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 ZBTB6Q15916 424 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 TEX35Q5T0J7 233 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 C11orf63Q6NUN7 778 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 PEX26Q7Z412 305 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 DAAM2Q86T65 1068 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 NT5DC3Q86UY8 548 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 TTC39CQ8N584 583 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 COG1Q8WTW3 980 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 KIF12Q96FN5 646 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 VCPIP1Q96JH7 1222 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 MMS19Q96T76 1030 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
CDK3-201ENST00000425876 SNTG2Q9NY99 539 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 CNTN3Q9P232 1028 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 DDX20Q9UHI6 824 aaKnown RBP15.4■□□□□ 0.06
CDK3-201ENST00000425876 PIN4Q9Y237 131 aaKnown RBP15.4■□□□□ 0.06
CDK3-201ENST00000425876 RALGAPA2Q2PPJ7 1873 aa15.4■□□□□ 0.06
CDK3-201ENST00000425876 ZNF185O15231 689 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 PAFAH1B1P43034 410 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 PRMT2P55345 433 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 PTPN11Q06124 597 aaPredicted RBP15.39■□□□□ 0.05
CDK3-201ENST00000425876 WDR72Q3MJ13 1102 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 XKR4Q5GH76 650 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 UBXN11Q5T124 520 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 RNF180Q86T96 592 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 MCOLN2Q8IZK6 566 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 CAGE1Q8TC20 777 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 RAET1EQ8TD07 263 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 ZNF606Q8WXB4 792 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 PBKQ96KB5 322 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 CAPZA3Q96KX2 299 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 PDCL3Q9H2J4 239 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 CTTNBP2NLQ9P2B4 639 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 AMFRQ9UKV5 643 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 COG5Q9UP83 839 aa15.39■□□□□ 0.05
CDK3-201ENST00000425876 PDE2AO00408 941 aaPredicted RBP15.38■□□□□ 0.05
CDK3-201ENST00000425876 THAP12O43422 761 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 LSM8O95777 96 aaKnown RBP15.38■□□□□ 0.05
CDK3-201ENST00000425876 TUBBP07437 444 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 PAEPP09466 180 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 POLR2BP30876 1174 aaKnown RBP15.38■□□□□ 0.05
CDK3-201ENST00000425876 NSFP46459 744 aaKnown RBP15.38■□□□□ 0.05
CDK3-201ENST00000425876 NOMO3P69849 1222 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 CFAP221Q4G0U5 840 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 MTERF4Q7Z6M4 381 aaKnown RBP15.38■□□□□ 0.05
CDK3-201ENST00000425876 FAM228AQ86W67 206 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 PHF13Q86YI8 300 aaPredicted RBP15.38■□□□□ 0.05
CDK3-201ENST00000425876 BEST2Q8NFU1 509 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 ZNF653Q96CK0 615 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 HES6Q96HZ4 224 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 HPDLQ96IR7 371 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 NXF1Q9UBU9 619 aaKnown RBP15.38■□□□□ 0.05
CDK3-201ENST00000425876 PCDHGC3Q9UN70 934 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 AGAP1Q9UPQ3 857 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 CDY2AQ9Y6F7 541 aa15.38■□□□□ 0.05
CDK3-201ENST00000425876 XPOTO43592 962 aaKnown RBP15.37■□□□□ 0.05
CDK3-201ENST00000425876 CAPN15O75808 1086 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 RECQL4O94761 1208 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 CALCAP01258 141 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 WEE2P0C1S8 567 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 KCNE1P15382 129 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 H2AFXP16104 143 aaPredicted RBP15.37■□□□□ 0.05
CDK3-201ENST00000425876 CD58P19256 250 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 MGAT3Q09327 533 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 FAM47CQ5HY64 1035 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 CCDC181Q5TID7 509 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 LRRC52Q8N7C0 313 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 MSANTD4Q8NCY6 345 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 SLAIN1Q8ND83 568 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 CYFIP2Q96F07 1278 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 RPS6KC1Q96S38 1066 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 SENP6Q9GZR1 1112 aaPredicted RBP15.37■□□□□ 0.05
CDK3-201ENST00000425876 NXF3Q9H4D5 531 aaKnown RBP15.37■□□□□ 0.05
CDK3-201ENST00000425876 CHST12Q9NRB3 414 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 UBQLN1Q9UMX0 589 aaKnown RBP15.37■□□□□ 0.05
CDK3-201ENST00000425876 POLIQ9UNA4 740 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 NOC2LQ9Y3T9 749 aaKnown RBP15.37■□□□□ 0.05
CDK3-201ENST00000425876 GRIN2DO15399 1336 aa15.37■□□□□ 0.05
CDK3-201ENST00000425876 CENPFP49454 3210 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms