RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SRGAP2O75044 1071 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 RECQL4O94761 1208 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 POLR2BP30876 1174 aaKnown RBP16.24■□□□□ 0.19
ACTB-204ENST00000425660 TUBB4BP68371 445 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CENPCQ03188 943 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 ITGA7Q13683 1181 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CREG2Q8IUH2 290 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 OSBPL9Q96SU4 736 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 TSEN34Q9BSV6 310 aaKnown RBP16.24■□□□□ 0.19
ACTB-204ENST00000425660 CYP3A43Q9HB55 503 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 ABCB6Q9NP58 842 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 GTF3C4Q9UKN8 822 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 COG5Q9UP83 839 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 MYH10P35580 1976 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CLSTN1O94985 981 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 FTCDO95954 541 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CYP1A2P05177 515 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 WEE2P0C1S8 567 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 PTGISQ16647 500 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 ERCC6LQ2NKX8 1250 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 PPP1R2P3Q6NXS1 205 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 ZNF606Q8WXB4 792 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 ANKRD7Q92527 254 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 UBXN4Q92575 508 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 HPDLQ96IR7 371 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CXCL16Q9H2A7 254 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CHST12Q9NRB3 414 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 AGAP1Q9UPQ3 857 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CITO14578 2027 aa16.24■□□□□ 0.19
ACTB-204ENST00000425660 CALCAP01258 141 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 P4HA1P13674 534 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 KCNE1P15382 129 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 GRK4P32298 578 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 PTK7Q13308 1070 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 ZNF572Q7Z3I7 529 aaPredicted RBP16.23■□□□□ 0.19
ACTB-204ENST00000425660 SMG8Q8ND04 991 aaKnown RBP16.23■□□□□ 0.19
ACTB-204ENST00000425660 RPGRIP1Q96KN7 1286 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 HMX1Q9NP08 348 aaPredicted RBP16.23■□□□□ 0.19
ACTB-204ENST00000425660 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
ACTB-204ENST00000425660 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.23■□□□□ 0.19
ACTB-204ENST00000425660 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 IPPQ9Y573 584 aa16.23■□□□□ 0.19
ACTB-204ENST00000425660 V9GYY5 206 aaPredicted RBP16.23■□□□□ 0.19
ACTB-204ENST00000425660 CTAGE15A4D2H0 777 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 CES2O00748 559 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 ZNF185O15231 689 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 NCK2O43639 380 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 BUB1BO60566 1050 aaPredicted RBP16.22■□□□□ 0.19
ACTB-204ENST00000425660 RPS6KA5O75582 802 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
ACTB-204ENST00000425660 CTAGE8P0CG41 777 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 CD58P19256 250 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 NOMO3P69849 1222 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
ACTB-204ENST00000425660 CTAGE6Q86UF2 777 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 NT5DC3Q86UY8 548 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 CTAGE4Q8IX94 777 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 TMEM130Q8N3G9 435 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 LRRC52Q8N7C0 313 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 COG1Q8WTW3 980 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 UBE2Q2Q8WVN8 375 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 GOLGA1Q92805 767 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 CYFIP2Q96F07 1278 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 UVRAGQ9P2Y5 699 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 RNF14Q9UBS8 474 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 PUF60Q9UHX1 559 aaKnown RBP16.22■□□□□ 0.19
ACTB-204ENST00000425660 UBQLN1Q9UMX0 589 aaKnown RBP16.22■□□□□ 0.19
ACTB-204ENST00000425660 ST3GAL5Q9UNP4 418 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 STXBP5LQ9Y2K9 1186 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 THAP12O43422 761 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 PAEPP09466 180 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 MYBL1P10243 752 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 AKAP5P24588 427 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 GUCY2FP51841 1108 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 ITIH3Q06033 890 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 INCA1Q0VD86 236 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 ELF2Q15723 593 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 TWF2Q6IBS0 349 aaKnown RBP16.22■□□□□ 0.19
ACTB-204ENST00000425660 C11orf63Q6NUN7 778 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 SCARA5Q6ZMJ2 495 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 DAAM2Q86T65 1068 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 MCOLN2Q8IZK6 566 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 TTC39CQ8N584 583 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 BEST2Q8NFU1 509 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 TRIM11Q96F44 468 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 VCPIP1Q96JH7 1222 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 GLT1D1Q96MS3 346 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 MMS19Q96T76 1030 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 SDCBP2Q9H190 292 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 RNF39Q9H2S5 420 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 AVENQ9NQS1 362 aaPredicted RBP16.22■□□□□ 0.19
ACTB-204ENST00000425660 PCDHGC3Q9UN70 934 aa16.22■□□□□ 0.19
ACTB-204ENST00000425660 SMIM28A0A1B0GU29 152 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 GPR182O15218 404 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 CAND2O75155 1236 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 CILPO75339 1184 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 KIF4AO95239 1232 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 LSM8O95777 96 aaKnown RBP16.21■□□□□ 0.19
ACTB-204ENST00000425660 CFHP08603 1231 aa16.21■□□□□ 0.19
ACTB-204ENST00000425660 CTSHP09668 335 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms