RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 MAGEB5Q9BZ81 275 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 SYNCQ9H7C4 482 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 PCDHB2Q9Y5E7 798 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 PSME4Q14997 1843 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 KIF13BQ9NQT8 1826 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 WDR81Q562E7 1941 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 CD48P09326 243 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 HOXA7P31268 230 aaPredicted RBP12.68□□□□□ -0.38
PTPRN-204ENST00000423636 NAMPTP43490 491 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 IFT88Q13099 833 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 MAMLD1Q13495 774 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 GDAP1Q8TB36 358 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 IMPG2Q9BZV3 1241 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 ST6GALNAC4Q9H4F1 302 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 TMBIM4Q9HC24 238 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 LRRD1A4D1F6 860 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 MAFGO15525 162 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 CYP1A2P05177 515 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 GARTP22102 1010 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 CUL1Q13616 776 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 ZNF699Q32M78 642 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 SRLQ86TD4 932 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 MICALL1Q8N3F8 863 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 JOSD2Q8TAC2 188 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 TMC2Q8TDI7 906 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 NLRP7Q8WX94 980 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 RAPGEF5Q92565 580 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 C12orf42Q96LP6 360 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 PAIP2Q9BPZ3 127 aaKnown RBP12.68□□□□□ -0.38
PTPRN-204ENST00000423636 EPB41L4BQ9H329 900 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 ZDHHC18Q9NUE0 388 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 KLK14Q9P0G3 267 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 PCDHA3Q9Y5H8 950 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 RLFQ13129 1914 aa12.68□□□□□ -0.38
PTPRN-204ENST00000423636 ITGA8P53708 1063 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 SIX1Q15475 284 aaPredicted RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 DENND2CQ68D51 928 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 METTL7BQ6UX53 244 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 MFSD7Q6UXD7 560 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 RIOX2Q8IUF8 465 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 CD101Q93033 1021 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 PIWIL1Q96J94 861 aaKnown RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 ADARB2Q9NS39 739 aaKnown RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 CYTH4Q9UIA0 394 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 PAPPA2Q9BXP8 1791 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 NOMO3P69849 1222 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 CHST13Q8NET6 341 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 LRRC45Q96CN5 670 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 TMEM121Q9BTD3 319 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 SLITRK6Q9H5Y7 841 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 KCNK9Q9NPC2 374 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 FAM49BQ9NUQ9 324 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 TULP2O00295 520 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 PPEF2O14830 753 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 P4HA2O15460 535 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 ECEL1O95672 775 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 GZMAP12544 262 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 GCLCP48506 637 aaPredicted RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 GHRHRQ02643 423 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 NEDD9Q14511 834 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 FASTKD3Q14CZ7 662 aaKnown RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 ATF7IP2Q5U623 682 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 USP37Q86T82 979 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 KIAA0319LQ8IZA0 1049 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 HSPH1Q92598 858 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 CALR3Q96L12 384 aaKnown RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 ACO2Q99798 780 aaKnown RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 RAB17Q9H0T7 212 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 MAP3K20Q9NYL2 800 aaKnown RBP12.67□□□□□ -0.38
PTPRN-204ENST00000423636 DNPEPQ9ULA0 475 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 ZNF148Q9UQR1 794 aa12.67□□□□□ -0.38
PTPRN-204ENST00000423636 KRT1P04264 644 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 IGFBP6P24592 240 aaPredicted RBP12.66□□□□□ -0.38
PTPRN-204ENST00000423636 RFC1P35251 1148 aaPredicted RBP12.66□□□□□ -0.38
PTPRN-204ENST00000423636 ATP11AP98196 1134 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 MYBPC2Q14324 1141 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 ZKSCAN8Q15776 578 aaPredicted RBP12.66□□□□□ -0.38
PTPRN-204ENST00000423636 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 FAM160B1Q5W0V3 765 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 ARMCX2Q7L311 632 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 ABRAQ8N0Z2 381 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 SLC10A4Q96EP9 437 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 SDCBP2Q9H190 292 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 CDHR5Q9HBB8 845 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 SETD4Q9NVD3 440 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 MTUS1Q9ULD2 1270 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 SYNJ2BP-COX16A0A087WUM0 186 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 LACTBL1A8MY62 500 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 PPFIA4O75335 1185 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 PHKA2P46019 1235 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 NUMBP49757 651 aa12.66□□□□□ -0.38
PTPRN-204ENST00000423636 CELF3Q5SZQ8 465 aaKnown RBP12.66□□□□□ -0.38
PTPRN-204ENST00000423636 JADE1Q6IE81 842 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms