RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 ACAD10Q6JQN1 1059 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 SLAIN1Q8ND83 568 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 UBE2Q2Q8WVN8 375 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 FAM212AQ96EL1 285 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 CHRNA1P02708 482 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 TRPC3Q13507 836 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 TRIM71Q2Q1W2 868 aaKnown RBP14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 ZNF699Q32M78 642 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 THAP2Q9H0W7 228 aa14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 PACSIN2Q9UNF0 486 aaPredicted RBP14.33□□□□□ -0.12
TMEM50B-201ENST00000420455 FTLP02792 175 aaPredicted RBP14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 KCNE1P15382 129 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 USP8P40818 1118 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 CENPCQ03188 943 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 RHOT2Q8IXI1 618 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 RBBP8NLQ8NC74 664 aaPredicted RBP14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 SLC35G2Q8TBE7 412 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 ARHGEF26Q96DR7 871 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 HYOU1Q9Y4L1 999 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 TRIP11Q15643 1979 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 MOXD2PA6NHM9 499 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 TUBB4BP68371 445 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 TRIM72Q6ZMU5 477 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 ZMAT2Q96NC0 199 aaKnown RBP14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 TRAIPQ9BWF2 469 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 CYP3A43Q9HB55 503 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 CHST12Q9NRB3 414 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 CISHQ9NSE2 258 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 SNTG2Q9NY99 539 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 NOC2LQ9Y3T9 749 aaKnown RBP14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 PCDHB4Q9Y5E5 795 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 CDY2AQ9Y6F7 541 aa14.32□□□□□ -0.12
TMEM50B-201ENST00000420455 CCDC151A5D8V7 595 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 KRT5P13647 590 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 GPC5P78333 572 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 ITIH3Q06033 890 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 PTK7Q13308 1070 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 RSPH3Q86UC2 560 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 SMG8Q8ND04 991 aaKnown RBP14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 ZNF296Q8WUU4 475 aaPredicted RBP14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 CTNNBL1Q8WYA6 563 aaPredicted RBP14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 CXCL16Q9H2A7 254 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 COG5Q9UP83 839 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 CAND2O75155 1236 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 ITGB3P05106 788 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 TCP1P17987 556 aaKnown RBP14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 CDH5P33151 784 aaPredicted RBP14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 PPP1R2P3Q6NXS1 205 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 TMEM270Q6UE05 265 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 RNF180Q86T96 592 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 RAET1EQ8TD07 263 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 MS4A14Q96JA4 679 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 OGFRQ9NZT2 677 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 PCDHGC3Q9UN70 934 aa14.31□□□□□ -0.12
TMEM50B-201ENST00000420455 ACLYP53396 1101 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 YWHAEP62258 255 aaKnown RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 CKAP4Q07065 602 aaKnown RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 INCA1Q0VD86 236 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 BEND6Q5SZJ8 279 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 TMCO3Q6UWJ1 677 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 HNRNPLLQ8WVV9 542 aaKnown RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 ARGLU1Q9NWB6 273 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 GTF3C4Q9UKN8 822 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 SQORQ9Y6N5 450 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 FAM170AA1A519 330 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 CYP3A5P20815 502 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 RBP5P82980 135 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 TAF3Q5VWG9 929 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 WDR93Q6P2C0 686 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 SYCE1Q8N0S2 351 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 WHAMMQ8TF30 809 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 VCPIP1Q96JH7 1222 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 FUT8Q9BYC5 575 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 SDCBP2Q9H190 292 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 NXF3Q9H4D5 531 aaKnown RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 AVENQ9NQS1 362 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 PIN4Q9Y237 131 aaKnown RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 INHAP05111 366 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 PAEPP09466 180 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 YY1P25490 414 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 GNA15P30679 374 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 NAP1L1P55209 391 aaKnown RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 CBX1P83916 185 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 BRD3Q15059 726 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 C11orf63Q6NUN7 778 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 PHF13Q86YI8 300 aaPredicted RBP14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 LRRC52Q8N7C0 313 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 SPATA4Q8NEY3 305 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 HES6Q96HZ4 224 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 RPGRIP1Q96KN7 1286 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 ZSWIM1Q9BR11 485 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 OSGEPQ9NPF4 335 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 DNAH12Q6ZR08 3092 aa14.3□□□□□ -0.12
TMEM50B-201ENST00000420455 MYBL1P10243 752 aa14.29□□□□□ -0.12
TMEM50B-201ENST00000420455 NOMO3P69849 1222 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms