RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 GOLPH3Q9H4A6 298 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 DERAQ9Y315 318 aa22.42■■□□□ 1.18
GPC1-202ENST00000420138 ZNF185O15231 689 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 RECQL4O94761 1208 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 CLSTN1O94985 981 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 CYP1A1P04798 512 aaPredicted RBP22.41■■□□□ 1.18
GPC1-202ENST00000420138 POLR2BP30876 1174 aaKnown RBP22.41■■□□□ 1.18
GPC1-202ENST00000420138 ATICP31939 592 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 ACLYP53396 1101 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 SDCBP2Q9H190 292 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 RNF39Q9H2S5 420 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 DPP3Q9NY33 737 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 CNTN3Q9P232 1028 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 PUF60Q9UHX1 559 aaKnown RBP22.41■■□□□ 1.18
GPC1-202ENST00000420138 ITGA11Q9UKX5 1188 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 CD58P19256 250 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 AKAP5P24588 427 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 GNA15P30679 374 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 IFI16Q16666 785 aaKnown RBP22.41■■□□□ 1.18
GPC1-202ENST00000420138 WDR72Q3MJ13 1102 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 ACAD10Q6JQN1 1059 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 SCARA5Q6ZMJ2 495 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 RSPH3Q86UC2 560 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 GPR161Q8N6U8 529 aaKnown RBP22.41■■□□□ 1.18
GPC1-202ENST00000420138 SMG8Q8ND04 991 aaKnown RBP22.41■■□□□ 1.18
GPC1-202ENST00000420138 COG1Q8WTW3 980 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 RABGGTAQ92696 567 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 ZSWIM1Q9BR11 485 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 OSBPL7Q9BZF2 842 aa22.41■■□□□ 1.18
GPC1-202ENST00000420138 NXF1Q9UBU9 619 aaKnown RBP22.41■■□□□ 1.18
GPC1-202ENST00000420138 STAU1O95793 577 aaKnown RBP22.4■■□□□ 1.18
GPC1-202ENST00000420138 CTSHP09668 335 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 HADHBP55084 474 aaKnown RBP22.4■■□□□ 1.18
GPC1-202ENST00000420138 GPC5P78333 572 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 PTGISQ16647 500 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 XKR4Q5GH76 650 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 ZNF667Q5HYK9 610 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 CREG2Q8IUH2 290 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 OSBPL9Q96SU4 736 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 TRIM6Q9C030 488 aaPredicted RBP22.4■■□□□ 1.18
GPC1-202ENST00000420138 AGAP1Q9UPQ3 857 aa22.4■■□□□ 1.18
GPC1-202ENST00000420138 DNAH12Q6ZR08 3092 aa22.39■■□□□ 1.18
GPC1-202ENST00000420138 CABYRO75952 493 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 TUBB4BP68371 445 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 ITGA7Q13683 1181 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 TEX35Q5T0J7 233 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 UNC93B1Q9H1C4 597 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 ABCB6Q9NP58 842 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 ARGLU1Q9NWB6 273 aaPredicted RBP22.39■■□□□ 1.17
GPC1-202ENST00000420138 PACSIN2Q9UNF0 486 aaPredicted RBP22.39■■□□□ 1.17
GPC1-202ENST00000420138 STXBP5LQ9Y2K9 1186 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 HYOU1Q9Y4L1 999 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 IPPQ9Y573 584 aa22.39■■□□□ 1.17
GPC1-202ENST00000420138 MOXD2PA6NHM9 499 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 M0QZ92 97 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 PDE2AO00408 941 aaPredicted RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 RAP1GAPP47736 663 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 YARSP54577 528 aaKnown RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 CDH8P55286 799 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 RBP5P82980 135 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 ARRDC4Q8NCT1 418 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 ZNF606Q8WXB4 792 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 CYFIP2Q96F07 1278 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 HPDLQ96IR7 371 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 MMS19Q96T76 1030 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 RNF19AQ9NV58 838 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 TUBGCP4Q9UGJ1 667 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 ST3GAL5Q9UNP4 418 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 BUB1BO60566 1050 aaPredicted RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 MYCP01106 439 aaPredicted RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 CYP1A2P05177 515 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 TRIM71Q2Q1W2 868 aaKnown RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 RHOT2Q8IXI1 618 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 WHAMMQ8TF30 809 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 C18orf25Q96B23 403 aaPredicted RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 PSMB7Q99436 277 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 TSEN34Q9BSV6 310 aaKnown RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 APOL6Q9BWW8 343 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 SMYD3Q9H7B4 428 aa22.38■■□□□ 1.17
GPC1-202ENST00000420138 TRMT13Q9NUP7 481 aaKnown RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 CHORDC1Q9UHD1 332 aaPredicted RBP22.38■■□□□ 1.17
GPC1-202ENST00000420138 PPEF2O14830 753 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 ATMINO43313 823 aaPredicted RBP22.37■■□□□ 1.17
GPC1-202ENST00000420138 RPS6KA5O75582 802 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 MTA2O94776 668 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 RPLP2P05387 115 aaKnown RBP22.37■■□□□ 1.17
GPC1-202ENST00000420138 TCP1P17987 556 aaKnown RBP22.37■■□□□ 1.17
GPC1-202ENST00000420138 CXCR5P32302 372 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 NOMO3P69849 1222 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 CENPCQ03188 943 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 ZNF394Q53GI3 561 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 GLRA4Q5JXX5 417 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 CAPZA3Q96KX2 299 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 GLT1D1Q96MS3 346 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 AGO3Q9H9G7 860 aaKnown RBP22.37■■□□□ 1.17
GPC1-202ENST00000420138 GTF3C4Q9UKN8 822 aa22.37■■□□□ 1.17
GPC1-202ENST00000420138 THAP12O43422 761 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 SSTR3P32745 418 aaPredicted RBP22.36■■□□□ 1.17
GPC1-202ENST00000420138 THPOP40225 353 aa22.36■■□□□ 1.17
GPC1-202ENST00000420138 NT5DC3Q86UY8 548 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms