RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NACC2Q96BF6 587 aa4.26□□□□□ -1.73
SDCBPP3-201ENST00000419629 ZSWIM1Q9BR11 485 aa4.26□□□□□ -1.73
SDCBPP3-201ENST00000419629 MAN1C1Q9NR34 630 aa4.26□□□□□ -1.73
SDCBPP3-201ENST00000419629 MTO1Q9Y2Z2 717 aaKnown RBP4.26□□□□□ -1.73
SDCBPP3-201ENST00000419629 LUC7L2Q9Y383 392 aaKnown RBP4.26□□□□□ -1.73
SDCBPP3-201ENST00000419629 CFAP20Q9Y6A4 193 aaKnown RBP4.26□□□□□ -1.73
SDCBPP3-201ENST00000419629 CCDC78A2IDD5 438 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 FZD9O00144 591 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 PCDHGA12O60330 932 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 ERN1O75460 977 aaKnown RBP4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 IL33O95760 270 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 POMCP01189 267 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 ANP32AP39687 249 aaKnown RBP4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 CXADRP78310 365 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 CDC42EP1Q00587 391 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 RAB39AQ14964 217 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 SEPT2Q15019 361 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 THEMIS2Q5TEJ8 643 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 AFMIDQ63HM1 303 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 OTUD7BQ6GQQ9 843 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 GADL1Q6ZQY3 521 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 TTC7BQ86TV6 843 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 DPF2Q92785 391 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 AIFM2Q9BRQ8 373 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 MRI1Q9BV20 369 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 C1QTNF7Q9BXJ2 289 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 KLK15Q9H2R5 256 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 LDAHQ9H6V9 325 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 GALNT9Q9HCQ5 603 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 SLC17A6Q9P2U8 582 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 TUBD1Q9UJT1 453 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 PCDHGA9Q9Y5G4 932 aaKnown RBP4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 PCDHGA8Q9Y5G5 932 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 PCDHGA7Q9Y5G6 932 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 PCDHGA6Q9Y5G7 932 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 PCDHGA3Q9Y5H0 932 aa4.25□□□□□ -1.73
SDCBPP3-201ENST00000419629 MYBBP1AQ9BQG0 1328 aaKnown RBP4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 CCDC154A6NI56 674 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 ALDH1L1O75891 902 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 DDCP20711 480 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 SEM1Q6ZVN7 128 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 COLGALT2Q8IYK4 626 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 FAM43AQ8N2R8 423 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 FBXO18Q8NFZ0 1043 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 NLGN4YQ8NFZ3 816 aaPredicted RBP4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 COA7Q96BR5 231 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 HSPBAP1Q96EW2 488 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 PTCD3Q96EY7 689 aaKnown RBP4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 TMX3Q96JJ7 454 aa4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 NUP88Q99567 741 aaPredicted RBP4.24□□□□□ -1.73
SDCBPP3-201ENST00000419629 IKBKBO14920 756 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 HTRA2O43464 458 aaPredicted RBP4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 RRP9O43818 475 aaKnown RBP4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 ARIH2O95376 493 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 GPANK1O95872 356 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 MTHFD1P11586 935 aaKnown RBP4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 FGFR4P22455 802 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 GCSHP23434 173 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 CTGFP29279 349 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 ALDH1A3P47895 512 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 SLC6A9P48067 706 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 EPHB1P54762 984 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 PROK1P58294 105 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 CTXN1P60606 82 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 SRSF4Q08170 494 aaKnown RBP4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 MTM1Q13496 603 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 TTF1Q15361 905 aaPredicted RBP4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 ZNF529Q6P280 563 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 CPA6Q8N4T0 437 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 AOPEPQ8N6M6 819 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 C9orf106Q8NAJ2 232 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 OR2I1PQ8NGU4 316 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 STON2Q8WXE9 905 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 C11orf54Q9H0W9 315 aaPredicted RBP4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 TCF7L1Q9HCS4 588 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 KMT5AQ9NQR1 393 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 FAM30AQ9NZY2 134 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 CALCOCO1Q9P1Z2 691 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 ARPP21Q9UBL0 812 aaPredicted RBP4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 ANKRD6Q9Y2G4 727 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 SIK3Q9Y2K2 1263 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 PCDHA13Q9Y5I0 950 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 ACTL7AQ9Y615 435 aa4.23□□□□□ -1.73
SDCBPP3-201ENST00000419629 EEA1Q15075 1411 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 PPM1GO15355 546 aaPredicted RBP4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 SLC16A6O15403 523 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 PEX1O43933 1283 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 PRSS23O95084 383 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 S100BP04271 92 aaPredicted RBP4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 AKAP5P24588 427 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 SMARCA1P28370 1054 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 ZNF81P51508 661 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 HSD11B2P80365 405 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 CYP2A13Q16696 494 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 ODR4Q5SWX8 454 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 GRASPQ7Z6J2 395 aaPredicted RBP4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 Q8N9P0 234 aaPredicted RBP4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 HOOK2Q96ED9 719 aa4.22□□□□□ -1.73
SDCBPP3-201ENST00000419629 ZNF778Q96MU6 729 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms