RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 RAP1GAPP47736 663 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 TAF6P49848 677 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 CDH8P55286 799 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
ATG4B-208ENST00000419606 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 TIGD5Q53EQ6 642 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 RRAGAQ7L523 313 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 TAS1R1Q7RTX1 841 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 RSPH1Q8WYR4 309 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 PCMTD1Q96MG8 357 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-208ENST00000419606 ARID3AQ99856 593 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 C17orf80Q9BSJ5 609 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 GANQ9H2C0 597 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 NKX2-4Q9H2Z4 354 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-208ENST00000419606 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-208ENST00000419606 PLXNA4Q9HCM2 1894 aa13.78□□□□□ -0.2
ATG4B-208ENST00000419606 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 A0A1W2PQC6 194 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 KPNA7A9QM74 516 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 RNF225M0QZC1 329 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 STAU1O95793 577 aaKnown RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 ATICP31939 592 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 TSC2P49815 1807 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 CETN1Q12798 172 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 MYO1EQ12965 1108 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 WDR44Q5JSH3 913 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 KLHDC7AQ5VTJ3 777 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 IQCEQ6IPM2 695 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 GPIHBP1Q8IV16 184 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 VSTM4Q8IW00 320 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 SLC39A11Q8N1S5 342 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 CLP1Q92989 425 aaKnown RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 B3GALT6Q96L58 329 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 SENP8Q96LD8 212 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 ZNF560Q96MR9 790 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 KREMEN1Q96MU8 473 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 ZNF558Q96NG5 402 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 COLEC11Q9BWP8 271 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 GPR62Q9BZJ7 368 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 VRTNQ9H8Y1 702 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 ADAM28Q9UKQ2 775 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 MTUS1Q9ULD2 1270 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 R3HCC1Q9Y3T6 440 aaKnown RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 PCDHA11Q9Y5I1 949 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 TIMM13Q9Y5L4 95 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 SNX9Q9Y5X1 595 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 FHOD1Q9Y613 1164 aa13.77□□□□□ -0.21
ATG4B-208ENST00000419606 LAMA2P24043 3122 aaKnown RBP13.77□□□□□ -0.21
ATG4B-208ENST00000419606 VWA8A3KMH1 1905 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 CYB561D2O14569 222 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 HCRTO43612 131 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 TADA2AO75478 443 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 WEE2P0C1S8 567 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 PNMA6AP0CW24 399 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-208ENST00000419606 LAG3P18627 525 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 ASPAP45381 313 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 ALDH7A1P49419 539 aaKnown RBP13.76□□□□□ -0.21
ATG4B-208ENST00000419606 AARSP49588 968 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATG4B-208ENST00000419606 MRE11P49959 708 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 SOWAHAQ2M3V2 549 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 SV2CQ496J9 727 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 ZNF667Q5HYK9 610 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 DSTYKQ6XUX3 929 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 PPM1KQ8N3J5 372 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 TAF4BQ92750 862 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 MRFAP1L1Q96HT8 127 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 IGSF21Q96ID5 467 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 NT5C1BQ96P26 610 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 NIF3L1Q9GZT8 377 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 CERS4Q9HA82 394 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 UBE2TQ9NPD8 197 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-208ENST00000419606 PLCB1Q9NQ66 1216 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 GDAP2Q9NXN4 497 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 APEX2Q9UBZ4 518 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
ATG4B-208ENST00000419606 CHD9Q3L8U1 2897 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 EFEMP2O95967 443 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
ATG4B-208ENST00000419606 CTNNB1P35222 781 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 BMPR1AP36894 532 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 PNPLA4P41247 253 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
ATG4B-208ENST00000419606 TAP1Q03518 808 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 GOLGA8FQ08AF8 430 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 GOLGA8DPQ0D2H9 430 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 CUL2Q13617 745 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 WSCD1Q658N2 575 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 TMC6Q7Z403 805 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 LIMS2Q7Z4I7 341 aa13.75□□□□□ -0.21
ATG4B-208ENST00000419606 OSTM1Q86WC4 334 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms