RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 OPHN1O60890 802 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 RECQL4O94761 1208 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 PRAMEF12O95522 483 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 MCM5P33992 734 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 PTGER3P43115 390 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 ABCG1P45844 678 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 ATXN3P54252 364 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-205ENST00000419020 CYP4F3Q08477 520 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 PTPAQ15257 358 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 MAPK6Q16659 721 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 NAIF1Q69YI7 327 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-205ENST00000419020 C3orf58Q8NDZ4 430 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 TSTD1Q8NFU3 115 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 OR2I1PQ8NGU4 316 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 ZMYND12Q9H0C1 365 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 HPS4Q9NQG7 708 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
DDX39B-205ENST00000419020 PPME1Q9Y570 386 aa12.81□□□□□ -0.36
DDX39B-205ENST00000419020 ATXN2Q99700 1313 aaKnown RBP12.81□□□□□ -0.36
DDX39B-205ENST00000419020 ESYT2A0FGR8 921 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 TBX3O15119 743 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 SH3BP5O60239 455 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 CFIP05156 583 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 DRD1P21728 446 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 GALK1P51570 392 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 POU5F1BQ06416 359 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 SRSF1Q07955 248 aaKnown RBP eCLIP12.8□□□□□ -0.36
DDX39B-205ENST00000419020 MXD4Q14582 209 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-205ENST00000419020 UPP1Q16831 310 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 FBXO43Q4G163 708 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 RASSF3Q86WH2 238 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 MINDY1Q8N5J2 469 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 EZH1Q92800 747 aaPredicted RBP12.8□□□□□ -0.36
DDX39B-205ENST00000419020 ACDQ96AP0 544 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 LRRC2Q9BYS8 371 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 GKN1Q9NS71 199 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
DDX39B-205ENST00000419020 AFF4Q9UHB7 1163 aaKnown RBP12.8□□□□□ -0.36
DDX39B-205ENST00000419020 FBXL5Q9UKA1 691 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 ATMQ13315 3056 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 COL12A1Q99715 3063 aa12.8□□□□□ -0.36
DDX39B-205ENST00000419020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 U2AF2P26368 475 aaKnown RBP eCLIP12.79□□□□□ -0.362e-13■■■□□ 16.4
DDX39B-205ENST00000419020 QARSP47897 775 aaKnown RBP12.79□□□□□ -0.36
DDX39B-205ENST00000419020 MCM2P49736 904 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 RUNX3Q13761 415 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 CAPSQ13938 189 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 TFDP1Q14186 410 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 TRIM68Q6AZZ1 485 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 ANO7Q6IWH7 933 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 TOGARAM2Q6ZUX3 1019 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 GAREM2Q75VX8 874 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 LPCAT2Q7L5N7 544 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 SLCO6A1Q86UG4 719 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 SGMS1Q86VZ5 419 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 TMEFF1Q8IYR6 380 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 ASAP3Q8TDY4 903 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 FNBP1Q96RU3 617 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 MTRQ99707 1265 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 FAM83CQ9BQN1 747 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 POLR3CQ9BUI4 534 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-205ENST00000419020 DNAJC25Q9H1X3 360 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 EBF3Q9H4W6 596 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 PRORYQ9H606 182 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 GOLGA2P5Q9HBQ8 144 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 C6orf50Q9HD87 102 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 POLMQ9NP87 494 aaPredicted RBP12.79□□□□□ -0.36
DDX39B-205ENST00000419020 XPNPEP1Q9NQW7 623 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
DDX39B-205ENST00000419020 PILRBQ9UKJ0 227 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 TPCN1Q9ULQ1 816 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 YIPF1Q9Y548 306 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 TEX15Q9BXT5 2789 aa12.79□□□□□ -0.36
DDX39B-205ENST00000419020 PCDH15Q96QU1 1955 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 PYCARD-AS1I3L0S3 204 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 EML1O00423 815 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 USP11P51784 963 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 GFPT1Q06210 699 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-205ENST00000419020 MRPL58Q14197 206 aaKnown RBP12.78□□□□□ -0.36
DDX39B-205ENST00000419020 PFKFB3Q16875 520 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-205ENST00000419020 GLRA4Q5JXX5 417 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 GPR158Q5T848 1215 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
DDX39B-205ENST00000419020 APOA5Q6Q788 366 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 RNF19BQ6ZMZ0 732 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 MARCH9Q86YJ5 346 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 MDGA1Q8NFP4 955 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 OLIG1Q8TAK6 271 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 RLN3Q8WXF3 142 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 CNOT6LQ96LI5 555 aaKnown RBP12.78□□□□□ -0.36
DDX39B-205ENST00000419020 PPP1R10Q96QC0 940 aaKnown RBP12.78□□□□□ -0.36
DDX39B-205ENST00000419020 P2RY13Q9BPV8 354 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 NFKBIZQ9BYH8 718 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 SMG9Q9H0W8 520 aaKnown RBP12.78□□□□□ -0.36
DDX39B-205ENST00000419020 MAFFQ9ULX9 164 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
DDX39B-205ENST00000419020 APOBEC2Q9Y235 224 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms