RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CARD9Q9H257 536 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 ARFGAP3Q9NP61 516 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 TTC7AQ9ULT0 858 aaPredicted RBP17.93■□□□□ 0.46
SSBP3-205ENST00000417664 GINS2Q9Y248 185 aa17.93■□□□□ 0.46
SSBP3-205ENST00000417664 MEFVO15553 781 aaPredicted RBP17.92■□□□□ 0.46
SSBP3-205ENST00000417664 NOMO3P69849 1222 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 IRX5P78411 483 aaPredicted RBP17.92■□□□□ 0.46
SSBP3-205ENST00000417664 RBP5P82980 135 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 PRKCZQ05513 592 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 TMEM62Q0P6H9 643 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 DEFB115Q30KQ5 88 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 LIN9Q5TKA1 542 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 PHF13Q86YI8 300 aaPredicted RBP17.92■□□□□ 0.46
SSBP3-205ENST00000417664 RASGEF1CQ8N431 466 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 NUP85Q9BW27 656 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 EPC1Q9H2F5 836 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 CNOT8Q9UFF9 292 aaKnown RBP17.92■□□□□ 0.46
SSBP3-205ENST00000417664 ALG6Q9Y672 507 aa17.92■□□□□ 0.46
SSBP3-205ENST00000417664 NPTXRO95502 500 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 ITGB3P05106 788 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 PAEPP09466 180 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 HOXD10P28358 340 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 C1QBPQ07021 282 aaKnown RBP17.91■□□□□ 0.46
SSBP3-205ENST00000417664 WDR72Q3MJ13 1102 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 MON1BQ7L1V2 547 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 RSPH3Q86UC2 560 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 UBL4BQ8N7F7 174 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 USP38Q8NB14 1042 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 CYFIP2Q96F07 1278 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 CAPNS2Q96L46 248 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 NAP1L3Q99457 506 aaPredicted RBP17.91■□□□□ 0.46
SSBP3-205ENST00000417664 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.462e-7■□□□□ 10
SSBP3-205ENST00000417664 TRIM6Q9C030 488 aaPredicted RBP17.91■□□□□ 0.46
SSBP3-205ENST00000417664 WNT8AQ9H1J5 351 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 GOLPH3Q9H4A6 298 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 CDHR5Q9HBB8 845 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 PCDHGC3Q9UN70 934 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 CITO14578 2027 aa17.91■□□□□ 0.46
SSBP3-205ENST00000417664 PGRMC1O00264 195 aaKnown RBP17.9■□□□□ 0.46
SSBP3-205ENST00000417664 FGFR4P22455 802 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 C2orf54Q08AI8 447 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 NAA35Q5VZE5 725 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 SNX27Q96L92 541 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 MRPL47Q9HD33 250 aaKnown RBP17.9■□□□□ 0.46
SSBP3-205ENST00000417664 DPP3Q9NY33 737 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 GTF2IRD1Q9UHL9 959 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 LCMT1Q9UIC8 334 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 SCN10AQ9Y5Y9 1956 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 M0QZ92 97 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 DDX3YO15523 660 aaKnown RBP17.9■□□□□ 0.46
SSBP3-205ENST00000417664 MED7O43513 233 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 CEP104O60308 925 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 DNA2P51530 1060 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 CACNB2Q08289 660 aaPredicted RBP17.9■□□□□ 0.46
SSBP3-205ENST00000417664 SCARA3Q6AZY7 606 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
SSBP3-205ENST00000417664 RPAINQ86UA6 219 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 SESTD1Q86VW0 696 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 TMEM35BQ8NCS4 154 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 CPA5Q8WXQ8 436 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 KIF12Q96FN5 646 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 HPDLQ96IR7 371 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 MS4A14Q96JA4 679 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 PNKPQ96T60 521 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 CREBZFQ9NS37 354 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 NXF1Q9UBU9 619 aaKnown RBP17.9■□□□□ 0.46
SSBP3-205ENST00000417664 TMEM59LQ9UK28 342 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 CEP83Q9Y592 693 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 SCINQ9Y6U3 715 aa17.9■□□□□ 0.46
SSBP3-205ENST00000417664 RALGAPA2Q2PPJ7 1873 aa17.89■□□□□ 0.46
SSBP3-205ENST00000417664 MYADML2A6NDP7 307 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 CCDC188H7C350 402 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 ZRANB2O95218 330 aaKnown RBP eCLIP17.89■□□□□ 0.458e-7■□□□□ 11.3
SSBP3-205ENST00000417664 WEE2P0C1S8 567 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 CD58P19256 250 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 CST5P28325 142 aaPredicted RBP17.89■□□□□ 0.45
SSBP3-205ENST00000417664 POLR2BP30876 1174 aaKnown RBP17.89■□□□□ 0.45
SSBP3-205ENST00000417664 CDH5P33151 784 aaPredicted RBP17.89■□□□□ 0.45
SSBP3-205ENST00000417664 SLC1A1P43005 524 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 TNNC1P63316 161 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 ZNF200P98182 395 aaPredicted RBP17.89■□□□□ 0.45
SSBP3-205ENST00000417664 MYO1EQ12965 1108 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 MAP9Q49MG5 647 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 CELF4Q9BZC1 486 aaKnown RBP17.89■□□□□ 0.45
SSBP3-205ENST00000417664 ADAM22Q9P0K1 906 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 CNTN3Q9P232 1028 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 AGAP1Q9UPQ3 857 aa17.89■□□□□ 0.45
SSBP3-205ENST00000417664 CCDC66A2RUB6 948 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 XPOTO43592 962 aaKnown RBP17.88■□□□□ 0.45
SSBP3-205ENST00000417664 ADAMTS4O75173 837 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 GNRH1P01148 92 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 MESDQ14696 234 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 ZBTB6Q15916 424 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 PPP2R5EQ16537 467 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 NBPF20Q3BBV1 942 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 ALKAL1Q6UXT8 129 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 BEST2Q8NFU1 509 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 LHX5Q9H2C1 402 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 XPNPEP3Q9NQH7 507 aa17.88■□□□□ 0.45
SSBP3-205ENST00000417664 RBM12Q9NTZ6 932 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms