RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 CNNM4Q6P4Q7 775 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 GRASPQ7Z6J2 395 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-206ENST00000417540 OSTM1Q86WC4 334 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 SMYD4Q8IYR2 804 aaPredicted RBP11.08□□□□□ -0.64
HDLBP-206ENST00000417540 SYCP3Q8IZU3 236 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 MAGEF1Q9HAY2 307 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 PDE11AQ9HCR9 933 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 CFAP45Q9UL16 551 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 UBE4BO95155 1302 aa11.08□□□□□ -0.64
HDLBP-206ENST00000417540 FAM237AA0A1B0GTK4 181 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 ANO9A1A5B4 782 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 M0QZQ0 153 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 SYN3O14994 580 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.645e-6■□□□□ 8.9
HDLBP-206ENST00000417540 CPB1P15086 417 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 CEBPBP17676 345 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 TFAMQ00059 246 aaKnown RBP11.07□□□□□ -0.64
HDLBP-206ENST00000417540 MRPL58Q14197 206 aaKnown RBP11.07□□□□□ -0.64
HDLBP-206ENST00000417540 BECN1Q14457 450 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
HDLBP-206ENST00000417540 PTPN21Q16825 1174 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 BMT2Q1RMZ1 405 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 CTXN3Q4LDR2 81 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 LIN9Q5TKA1 542 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 SLC8B1Q6J4K2 584 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 HFE2Q6ZVN8 426 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 CEP57L1Q8IYX8 460 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 BEST2Q8NFU1 509 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 CMASQ8NFW8 434 aaPredicted RBP11.07□□□□□ -0.64
HDLBP-206ENST00000417540 ITFG1Q8TB96 612 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 RIPOR3Q96MK2 946 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 PLEKHA5Q9HAU0 1116 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 POLIQ9UNA4 740 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 C2CD2Q9Y426 696 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 YIPF1Q9Y548 306 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 INSL5Q9Y5Q6 135 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 MIA3Q5JRA6 1907 aa11.07□□□□□ -0.64
HDLBP-206ENST00000417540 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 ANAPC1Q9H1A4 1944 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 MTMR11A4FU01 709 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 PIRO00625 290 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 EXTL3O43909 919 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 PAPLNO95428 1278 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 SLFN14P0C7P3 912 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 CYP3A5P20815 502 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 GARTP22102 1010 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 CMA1P23946 247 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 RPL9P32969 192 aaKnown RBP11.06□□□□□ -0.64
HDLBP-206ENST00000417540 CCR2P41597 374 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 SYKP43405 635 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 GPR15P49685 360 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 CREMQ03060 361 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 DPYDQ12882 1025 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 BFSP1Q12934 665 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 PNOCQ13519 176 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 RAB33AQ14088 237 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 PPM1LQ5SGD2 360 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 ATL3Q6DD88 541 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 DSTYKQ6XUX3 929 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 KRBA2Q6ZNG9 492 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 C15orf39Q6ZRI6 1047 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 ANKS3Q6ZW76 656 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 GPD1LQ8N335 351 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 TCEAL4Q96EI5 215 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 ASIC4Q96FT7 647 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 SENP8Q96LD8 212 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 NECTIN4Q96NY8 510 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 RHOBTB2Q9BYZ6 727 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 DNAJC25Q9H1X3 360 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 WDR6Q9NNW5 1121 aaKnown RBP11.06□□□□□ -0.64
HDLBP-206ENST00000417540 ZDHHC7Q9NXF8 308 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 DPP3Q9NY33 737 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 L1RE1Q9UN81 338 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 SSX2IPQ9Y2D8 614 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 NME7Q9Y5B8 376 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 BACE2Q9Y5Z0 518 aa11.06□□□□□ -0.64
HDLBP-206ENST00000417540 ZNF638Q14966 1978 aaKnown RBP11.05□□□□□ -0.64
HDLBP-206ENST00000417540 GADD45BO75293 160 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-206ENST00000417540 RPN1P04843 607 aaKnown RBP11.05□□□□□ -0.64
HDLBP-206ENST00000417540 ODC1P11926 461 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 GJA1P17302 382 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 ACAT1P24752 427 aaKnown RBP11.05□□□□□ -0.64
HDLBP-206ENST00000417540 GBP2P32456 591 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-206ENST00000417540 VCPP55072 806 aaKnown RBP11.05□□□□□ -0.64
HDLBP-206ENST00000417540 LILRA4P59901 499 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 YWHAHQ04917 246 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-206ENST00000417540 TWF1Q12792 350 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 ALCAMQ13740 583 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 IER5LQ5T953 404 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 WSCD1Q658N2 575 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 RDH13Q8NBN7 331 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 BORCS6Q96GS4 357 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 LPIN3Q9BQK8 851 aa11.05□□□□□ -0.64
HDLBP-206ENST00000417540 PYM1Q9BRP8 204 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms