RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ZMAT2Q96NC0 199 aaKnown RBP10.96□□□□□ -0.65
MDC1-202ENST00000416571 TBC1D32Q96NH3 1257 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 TARS2Q9BW92 718 aaKnown RBP10.96□□□□□ -0.65
MDC1-202ENST00000416571 RAB34Q9BZG1 259 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 KMT5AQ9NQR1 393 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 SEMA4GQ9NTN9 838 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 DDX19AQ9NUU7 478 aaKnown RBP10.96□□□□□ -0.65
MDC1-202ENST00000416571 CEP72Q9P209 647 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 CNTN3Q9P232 1028 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 LRWD1Q9UFC0 647 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 KIAA1024Q9UPX6 916 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 F5P12259 2224 aa10.96□□□□□ -0.66
MDC1-202ENST00000416571 ASPMQ8IZT6 3477 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 SLC38A8A6NNN8 435 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 HEPACAM2A8MVW5 462 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 CHURC1-FNTBB4DL54 471 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 DPYSL4O14531 572 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 CHRNB1P11230 501 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 NPTX2P47972 431 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 FNTBP49356 437 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 YWHAHQ04917 246 aaPredicted RBP10.95□□□□□ -0.66
MDC1-202ENST00000416571 STRN3Q13033 797 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 CSRP2Q16527 193 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 TTC38Q5R3I4 469 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 HEATR6Q6AI08 1181 aaKnown RBP10.95□□□□□ -0.66
MDC1-202ENST00000416571 MPZL3Q6UWV2 235 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 CEP68Q76N32 757 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 HAUS6Q7Z4H7 955 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 USP37Q86T82 979 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 LONP2Q86WA8 852 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 SNX29Q8TEQ0 813 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 DDX1Q92499 740 aaKnown RBP10.95□□□□□ -0.66
MDC1-202ENST00000416571 C18orf25Q96B23 403 aaPredicted RBP10.95□□□□□ -0.66
MDC1-202ENST00000416571 C8orf76Q96K31 380 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 DRC1Q96MC2 740 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 C8orf33Q9H7E9 229 aaPredicted RBP10.95□□□□□ -0.66
MDC1-202ENST00000416571 TRPV4Q9HBA0 871 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 ANKFY1Q9P2R3 1169 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 NOL7Q9UMY1 257 aaKnown RBP10.95□□□□□ -0.66
MDC1-202ENST00000416571 RBM19Q9Y4C8 960 aaKnown RBP10.95□□□□□ -0.66
MDC1-202ENST00000416571 YIPF1Q9Y548 306 aa10.95□□□□□ -0.66
MDC1-202ENST00000416571 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 NRG2O14511 850 aaPredicted RBP10.94□□□□□ -0.66
MDC1-202ENST00000416571 CHADO15335 359 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 HIP1RO75146 1068 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 MOSPD3O75425 235 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 MATR3P43243 847 aaKnown RBP eCLIP10.94□□□□□ -0.66
MDC1-202ENST00000416571 ALDH1A3P47895 512 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.663e-6■□□□□ 10.7
MDC1-202ENST00000416571 EPHB3P54753 998 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 EPHA5P54756 1037 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 PTGDRQ13258 359 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 ECM1Q16610 540 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 DGKKQ5KSL6 1271 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 IL31Q6EBC2 164 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 SHKBP1Q8TBC3 707 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 PGLYRP2Q96PD5 576 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 OXCT2Q9BYC2 517 aaPredicted RBP10.94□□□□□ -0.66
MDC1-202ENST00000416571 PTPRHQ9HD43 1115 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 RBM12Q9NTZ6 932 aaKnown RBP10.94□□□□□ -0.66
MDC1-202ENST00000416571 ARHGAP28Q9P2N2 729 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 PCDHB8Q9UN66 801 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 DNM3Q9UQ16 869 aa10.94□□□□□ -0.66
MDC1-202ENST00000416571 E9PMD0 336 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 ARNTLO00327 626 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 SLC16A4O15374 487 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 HRO43593 1189 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 TOM1L1O75674 476 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 SOX9P48436 509 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 NEK4P51957 841 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 SMTNP53814 917 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 FCHO2Q0JRZ9 810 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 SRSF5Q13243 272 aaKnown RBP10.93□□□□□ -0.66
MDC1-202ENST00000416571 GAS6Q14393 721 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 NOLC1Q14978 699 aaKnown RBP eCLIP10.93□□□□□ -0.66
MDC1-202ENST00000416571 AASDHQ4L235 1098 aaPredicted RBP10.93□□□□□ -0.66
MDC1-202ENST00000416571 ARHGAP29Q52LW3 1261 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 ARHGAP15Q53QZ3 475 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 KRT79Q5XKE5 535 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 DSTYKQ6XUX3 929 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 RALGPS2Q86X27 583 aaPredicted RBP10.93□□□□□ -0.66
MDC1-202ENST00000416571 TTC8Q8TAM2 541 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
MDC1-202ENST00000416571 C17orf75Q9HAS0 396 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 TUBGCP4Q9UGJ1 667 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 KCNG1Q9UIX4 513 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 TIMM13Q9Y5L4 95 aaPredicted RBP10.93□□□□□ -0.66
MDC1-202ENST00000416571 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.93□□□□□ -0.66
MDC1-202ENST00000416571 MYH11P35749 1972 aa10.93□□□□□ -0.66
MDC1-202ENST00000416571 NUP210Q8TEM1 1887 aaPredicted RBP10.93□□□□□ -0.66
MDC1-202ENST00000416571 NCANO14594 1321 aa10.92□□□□□ -0.66
MDC1-202ENST00000416571 SPECC1L-ADORA2AF8WAN1 911 aa10.92□□□□□ -0.66
MDC1-202ENST00000416571 CLDN3O15551 220 aa10.92□□□□□ -0.66
MDC1-202ENST00000416571 XPOTO43592 962 aaKnown RBP10.92□□□□□ -0.66
MDC1-202ENST00000416571 GDF9O60383 454 aa10.92□□□□□ -0.66
MDC1-202ENST00000416571 PAPSS2O95340 614 aaPredicted RBP10.92□□□□□ -0.66
MDC1-202ENST00000416571 FGF19O95750 216 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms