RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 DRC1Q96MC2 740 aa16.82■□□□□ 0.28
DDX56-202ENST00000415758 LRRC3Q9BY71 257 aa16.82■□□□□ 0.28
DDX56-202ENST00000415758 DNM3Q9UQ16 869 aa16.82■□□□□ 0.28
DDX56-202ENST00000415758 HEPACAM2A8MVW5 462 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 SLC30A4O14863 429 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 CHADO15335 359 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 HRO43593 1189 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 HIP1RO75146 1068 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 TOM1L1O75674 476 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 KRT37O76014 449 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 MYL4P12829 197 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 GJA1P17302 382 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 CCNE1P24864 410 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 SATB1Q01826 763 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 TEAD2Q15562 447 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 C1orf186Q6ZWK4 172 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 FBXO18Q8NFZ0 1043 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 SHKBP1Q8TBC3 707 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 RAB34Q9BZG1 259 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 C8orf33Q9H7E9 229 aaPredicted RBP16.81■□□□□ 0.28
DDX56-202ENST00000415758 KCNG1Q9UIX4 513 aa16.81■□□□□ 0.28
DDX56-202ENST00000415758 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.81■□□□□ 0.28
DDX56-202ENST00000415758 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.81■□□□□ 0.28
DDX56-202ENST00000415758 E9PMD0 336 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 VNN2O95498 520 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 CPB1P15086 417 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 MARCKSP29966 332 aaPredicted RBP16.8■□□□□ 0.28
DDX56-202ENST00000415758 LRPAP1P30533 357 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 YWHAHQ04917 246 aaPredicted RBP16.8■□□□□ 0.28
DDX56-202ENST00000415758 SIM2Q14190 667 aaPredicted RBP16.8■□□□□ 0.28
DDX56-202ENST00000415758 CSRP2Q16527 193 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 LPAL2Q16609 132 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 RINT1Q6NUQ1 792 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 ZBTB45Q96K62 511 aaPredicted RBP16.8■□□□□ 0.28
DDX56-202ENST00000415758 LLPHQ9BRT6 129 aaKnown RBP16.8■□□□□ 0.28
DDX56-202ENST00000415758 TIPINQ9BVW5 301 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 PLEKHA5Q9HAU0 1116 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 SEMA4GQ9NTN9 838 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 RALGAPA1Q6GYQ0 2036 aa16.8■□□□□ 0.28
DDX56-202ENST00000415758 K7ESF4 209 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 SLC16A4O15374 487 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 FOXD2O60548 495 aaPredicted RBP16.79■□□□□ 0.28
DDX56-202ENST00000415758 HOXA6P31267 233 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 AARSP49588 968 aaKnown RBP eCLIP16.79■□□□□ 0.28
DDX56-202ENST00000415758 PLD1Q13393 1074 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 LRRC32Q14392 662 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 ZBTB6Q15916 424 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 DGKKQ5KSL6 1271 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 TMC8Q8IU68 726 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 CSGALNACT1Q8TDX6 532 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 SPIRE2Q8WWL2 714 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 RSPRY1Q96DX4 576 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 DNAJC25Q9H1X3 360 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 YIPF1Q9Y548 306 aa16.79■□□□□ 0.28
DDX56-202ENST00000415758 A0A1W2PRU2 124 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 MYBPHLA2RUH7 354 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 CYP3A5P20815 502 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 GUCY2CP25092 1073 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 MCL1Q07820 350 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 DMWDQ09019 674 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 STRN3Q13033 797 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 GPR17Q13304 367 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 NOLC1Q14978 699 aaKnown RBP eCLIP16.78■□□□□ 0.28
DDX56-202ENST00000415758 WDR44Q5JSH3 913 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 PRR23CQ6ZRP0 262 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 PRR23BQ6ZRT6 265 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 LONP2Q86WA8 852 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 RALGPS2Q86X27 583 aaPredicted RBP16.78■□□□□ 0.28
DDX56-202ENST00000415758 YAF2Q8IY57 180 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 TMEM161BQ8NDZ6 487 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 CRISPLD1Q9H336 500 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 OBP2AQ9NY56 170 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 TUBGCP4Q9UGJ1 667 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 NOL7Q9UMY1 257 aaKnown RBP16.78■□□□□ 0.28
DDX56-202ENST00000415758 ASB3Q9Y575 518 aa16.78■□□□□ 0.28
DDX56-202ENST00000415758 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.77■□□□□ 0.28
DDX56-202ENST00000415758 TTC26A0AVF1 554 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 OR6C75A6NL08 312 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 SFI1A8K8P3 1242 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 CHURC1-FNTBB4DL54 471 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 LAD1O00515 517 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 CLDN3O15551 220 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 U2AF2P26368 475 aaKnown RBP eCLIP16.77■□□□□ 0.281e-6■■■□□ 17.4
DDX56-202ENST00000415758 WEE1P30291 646 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 FNTBP49356 437 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 TOB1P50616 345 aaPredicted RBP16.77■□□□□ 0.28
DDX56-202ENST00000415758 KPNA1P52294 538 aaPredicted RBP16.77■□□□□ 0.28
DDX56-202ENST00000415758 EPHB3P54753 998 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 DUSP4Q13115 394 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 NBR1Q14596 966 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 SEZ6Q53EL9 994 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 PPM1JQ5JR12 505 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 CENPPQ6IPU0 288 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 KCNK18Q7Z418 384 aa16.77■□□□□ 0.28
DDX56-202ENST00000415758 ARID3BQ8IVW6 561 aaPredicted RBP16.77■□□□□ 0.28
DDX56-202ENST00000415758 SYNPOQ8N3V7 929 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms