RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 CFAP99D6REC4 459 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 HARS2P49590 506 aaKnown RBP19.24■□□□□ 0.67
HCG11-201ENST00000411553 SHCBP1Q8NEM2 672 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 IGDCC4Q8TDY8 1250 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 RIT2Q99578 217 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 TMEM161AQ9NX61 479 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 CD274Q9NZQ7 290 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 ARHGEF40Q8TER5 1519 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 FAM205CA6NFA0 338 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 ANKRD65E5RJM6 399 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 PDHBP11177 359 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 ALDH1A3P47895 512 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 RGS4P49798 205 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 PTRHD1Q6GMV3 140 aaKnown RBP19.24■□□□□ 0.67
HCG11-201ENST00000411553 ZNF34Q8IZ26 560 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 SNX31Q8N9S9 440 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 NUDT12Q9BQG2 462 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 TASP1Q9H6P5 420 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 OLFML3Q9NRN5 406 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 NEU2Q9Y3R4 380 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 PCDHB7Q9Y5E2 793 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 LAMC1P11047 1609 aa19.24■□□□□ 0.67
HCG11-201ENST00000411553 DMC1Q14565 340 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 R3HDM1Q15032 1099 aaKnown RBP19.23■□□□□ 0.67
HCG11-201ENST00000411553 MTFR1Q15390 333 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 EDRF1Q3B7T1 1238 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 TRAPPC11Q7Z392 1133 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 CATSPER1Q8NEC5 780 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 FAM129AQ9BZQ8 928 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 TMEM8AQ9HCN3 771 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 MYMKA6NI61 221 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 EXTL3O43909 919 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 LRRC74AQ0VAA2 488 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 EFHC1Q5JVL4 640 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 NOTUMQ6P988 496 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 RFX8Q6ZV50 586 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 SPATA21Q7Z572 469 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 LRRC71Q8N4P6 559 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 SLC25A41Q8N5S1 370 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 LRRC1Q9BTT6 524 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 IGSF9BQ9UPX0 1349 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
HCG11-201ENST00000411553 PGM1P36871 562 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 STX3Q13277 289 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 TERF2Q15554 542 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 CCDC85BQ15834 202 aaPredicted RBP19.23■□□□□ 0.67
HCG11-201ENST00000411553 C20orf96Q9NUD7 363 aaPredicted RBP19.23■□□□□ 0.67
HCG11-201ENST00000411553 PSD3Q9NYI0 1048 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 PAK5Q9P286 719 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 MTF1Q14872 753 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 E2F4Q16254 413 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 GOLGA7BQ2TAP0 167 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 XRRA1Q6P2D8 792 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 B4GALNT2Q8NHY0 566 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 MYOZ2Q9NPC6 264 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 PCDHB2Q9Y5E7 798 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 A0A1B0GTH6 734 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 SUPT3HB4E1H0 165 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 PJA2O43164 708 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 GMPSP49915 693 aaPredicted RBP19.23■□□□□ 0.67
HCG11-201ENST00000411553 ZNF200P98182 395 aaPredicted RBP19.23■□□□□ 0.67
HCG11-201ENST00000411553 DCAF6Q58WW2 860 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 AARS2Q5JTZ9 985 aaKnown RBP19.23■□□□□ 0.67
HCG11-201ENST00000411553 SPATA16Q9BXB7 569 aa19.23■□□□□ 0.67
HCG11-201ENST00000411553 PSMC3IPQ9P2W1 217 aaPredicted RBP19.23■□□□□ 0.67
HCG11-201ENST00000411553 GPD1P21695 349 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 BYSLQ13895 437 aaKnown RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 VPS72Q15906 364 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 PRMT1Q99873 361 aaKnown RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 RSAD1Q9HA92 442 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 CAMTA2O94983 1202 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 ENO1P06733 434 aaKnown RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 KDSRQ06136 332 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 ZC2HC1CQ53FD0 456 aaPredicted RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 PRAMEF18Q5VWM3 479 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 NUP93Q8N1F7 819 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 ZFYVE19Q96K21 471 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 SLITRK1Q96PX8 696 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 TCP11X1B4DZS4 312 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 HSPA1AP0DMV8 641 aaKnown RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 HSPA1BP0DMV9 641 aaKnown RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 MYL2P10916 166 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 LAMC2Q13753 1193 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 GNASQ5JWF2 1037 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.22■□□□□ 0.67
HCG11-201ENST00000411553 TRIM51Q9BSJ1 452 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 NAGPAQ9UK23 515 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 TET3O43151 1660 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 NPTXRO95502 500 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 RASA1P20936 1047 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 SPRP35270 261 aaPredicted RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 RAD23BP54727 409 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 HUNKP57058 714 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 ARHGAP15Q53QZ3 475 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 TJAP1Q5JTD0 557 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 CHSY1Q86X52 802 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 MS4A14Q96JA4 679 aa19.22■□□□□ 0.67
HCG11-201ENST00000411553 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
HCG11-201ENST00000411553 NIF3L1Q9GZT8 377 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms