RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 SMYD3Q9H7B4 428 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 IMPACTQ9P2X3 320 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 ANO9A1A5B4 782 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 GOLGA6L6A8MZA4 724 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 TUSC3Q13454 348 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 UPP1Q16831 310 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 GPR88Q9GZN0 384 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 DGKIO75912 1065 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 GFPT2O94808 682 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 SKILP12757 684 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 ASPAP45381 313 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 LILRA4P59901 499 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 CUL2Q13617 745 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 C9orf50Q5SZB4 431 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 ZNF397Q8NF99 534 aaPredicted RBP13.5□□□□□ -0.25
PMS1-204ENST00000409823 TIMM13Q9Y5L4 95 aaPredicted RBP13.5□□□□□ -0.25
PMS1-204ENST00000409823 F8VZ95 297 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 KRT5P13647 590 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 CYP3A5P20815 502 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 MAGEA10P43363 369 aaPredicted RBP13.5□□□□□ -0.25
PMS1-204ENST00000409823 ZBED6P86452 979 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 TRIM14Q14142 442 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 FIGNQ5HY92 759 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 NIF3L1Q9GZT8 377 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 NRDE2Q9H7Z3 1164 aa13.5□□□□□ -0.25
PMS1-204ENST00000409823 KPNA7A9QM74 516 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 KIF4AO95239 1232 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 PLEKP08567 350 aaPredicted RBP13.49□□□□□ -0.25
PMS1-204ENST00000409823 BRCC3P46736 316 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 MFAP3P55082 362 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 BCAR1P56945 870 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 TNNC1P63316 161 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 CNGA4Q8IV77 575 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 ZBED2Q9BTP6 218 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 STK33Q9BYT3 514 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 SDCBP2Q9H190 292 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 NR2E3Q9Y5X4 410 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 RALGAPA2Q2PPJ7 1873 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 A0A1W2PQJ5 194 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 HCRTO43612 131 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 BAIAP3O94812 1187 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 LRPAP1P30533 357 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 TAF6P49848 677 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 SPOUT1Q5T280 376 aaKnown RBP13.49□□□□□ -0.25
PMS1-204ENST00000409823 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 PSRC1Q6PGN9 363 aaPredicted RBP13.49□□□□□ -0.25
PMS1-204ENST00000409823 TMEM270Q6UE05 265 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
PMS1-204ENST00000409823 LRRC8AQ8IWT6 810 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 COLGALT2Q8IYK4 626 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 OR8K1Q8NGG5 319 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 CHP1Q99653 195 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 KANSL3Q9P2N6 904 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 CYP26A1O43174 497 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 JAM2P57087 298 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 GCNT1Q02742 428 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 DSC1Q08554 894 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 WDR59Q6PJI9 974 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 CISHQ9NSE2 258 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 SLC4A7Q9Y6M7 1214 aa13.49□□□□□ -0.25
PMS1-204ENST00000409823 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 INPPL1O15357 1258 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 HOXA2O43364 376 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 ATICP31939 592 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 SSTR3P32745 418 aaPredicted RBP13.48□□□□□ -0.25
PMS1-204ENST00000409823 GSDMDP57764 484 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 BTG3Q14201 252 aaPredicted RBP13.48□□□□□ -0.25
PMS1-204ENST00000409823 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 MRPL45Q9BRJ2 306 aaKnown RBP13.48□□□□□ -0.25
PMS1-204ENST00000409823 PCDHB4Q9Y5E5 795 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 REV3LO60673 3130 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 NRP1O14786 923 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 EFCAB14O75071 495 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 SOWAHAQ2M3V2 549 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 TIGD5Q53EQ6 642 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 SFMBT2Q5VUG0 894 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 FAM109BQ6ICB4 259 aaPredicted RBP13.48□□□□□ -0.25
PMS1-204ENST00000409823 SLC47A2Q86VL8 602 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 B3GALT6Q96L58 329 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 TSPAN18Q96SJ8 248 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
PMS1-204ENST00000409823 TDRD15B5MCY1 1934 aaKnown RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 CYB561D2O14569 222 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 GJB5O95377 273 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 ATP2A2P16615 1042 aaKnown RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 SOX5P35711 763 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 SLC11A1P49279 550 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 RABGGTBP53611 331 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 DSTYKQ6XUX3 929 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 LRRC43Q8N309 656 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms