RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 STK39Q9UEW8 545 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 KPNA7A9QM74 516 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 HUS1O60921 280 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 TADA2AO75478 443 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 UCHL3P15374 230 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 PPM1AP35813 382 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 LILRA4P59901 499 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 DSTYKQ6XUX3 929 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 DPH6Q7L8W6 267 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 TMCO2Q7Z6W1 182 aaPredicted RBP16.39■□□□□ 0.21
AP1S3-204ENST00000409375 SPAG5Q96R06 1193 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 PI4K2AQ9BTU6 479 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
AP1S3-204ENST00000409375 CYP3A43Q9HB55 503 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 GDAP2Q9NXN4 497 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 IMPACTQ9P2X3 320 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 NXF1Q9UBU9 619 aaKnown RBP16.39■□□□□ 0.21
AP1S3-204ENST00000409375 DSEQ9UL01 958 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 PCDHB12Q9Y5F1 795 aa16.39■□□□□ 0.21
AP1S3-204ENST00000409375 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 A0A1W2PQJ5 194 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 NRP1O14786 923 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 GALTP07902 379 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 FAM163BP0C2L3 166 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 ODC1P11926 461 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 BCAR1P56945 870 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 CUL2Q13617 745 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 TSR1Q2NL82 804 aaKnown RBP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 MMS19Q96T76 1030 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 CWH43Q9H720 699 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 UBE2TQ9NPD8 197 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 DNAJB4Q9UDY4 337 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 DNAJC12Q9UKB3 198 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 ADAM28Q9UKQ2 775 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 PRG3Q9Y2Y8 225 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 PCDHA11Q9Y5I1 949 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 SNX9Q9Y5X1 595 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 SF3B1O75533 1304 aaKnown RBP eCLIP16.38■□□□□ 0.21
AP1S3-204ENST00000409375 SCN1AP35498 2009 aa16.38■□□□□ 0.21
AP1S3-204ENST00000409375 PPEF2O14830 753 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 KIF4AO95239 1232 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 CCDC172P0C7W6 258 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 SLC11A1P49279 550 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 KLK7P49862 253 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 POLR2FP61218 127 aaKnown RBP16.37■□□□□ 0.21
AP1S3-204ENST00000409375 RAPGEF1Q13905 1077 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 RAB30Q15771 203 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 SPOPLQ6IQ16 392 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 KCNT2Q6UVM3 1135 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 METTL23Q86XA0 190 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 CNGA4Q8IV77 575 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 TDHQ8IZJ6 230 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 TOP6BLQ8N6T0 577 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 APPL2Q8NEU8 664 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 SPATA18Q8TC71 538 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 TMEM169Q96HH4 297 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 SAMD11Q96NU1 681 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 GANQ9H2C0 597 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.21
AP1S3-204ENST00000409375 SPG21Q9NZD8 308 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 MSRAQ9UJ68 235 aa16.37■□□□□ 0.21
AP1S3-204ENST00000409375 MRPL42Q9Y6G3 142 aaKnown RBP16.37■□□□□ 0.21
AP1S3-204ENST00000409375 CYB561D2O14569 222 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 AARSP49588 968 aaKnown RBP eCLIP16.36■□□□□ 0.21
AP1S3-204ENST00000409375 RRAGAQ7L523 313 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 ARHGEF19Q8IW93 802 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 TMEM86AQ8N2M4 240 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 COLGALT1Q8NBJ5 622 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 TATDN2Q93075 761 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 SUSD3Q96L08 255 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 SENP8Q96LD8 212 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 PPP1R9BQ96SB3 815 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 PAAF1Q9BRP4 392 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 STK33Q9BYT3 514 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 BCO2Q9BYV7 579 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 CAPN11Q9UMQ6 739 aa16.36■□□□□ 0.21
AP1S3-204ENST00000409375 CEP290O15078 2479 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 SYN3O14994 580 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 B4GALT3O60512 393 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 TACC1O75410 805 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 STAT1P42224 750 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 ASPAP45381 313 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 GSDMDP57764 484 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 ZBED6P86452 979 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 KRT17Q04695 432 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 PTPN21Q16825 1174 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 IQCEQ6IPM2 695 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 FUT10Q6P4F1 479 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 SCARA5Q6ZMJ2 495 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 C3orf58Q8NDZ4 430 aa16.35■□□□□ 0.21
AP1S3-204ENST00000409375 CLP1Q92989 425 aaKnown RBP16.35■□□□□ 0.21
AP1S3-204ENST00000409375 PLVAPQ9BX97 442 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms