RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TTC7BQ86TV6 843 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ECHDC2Q86YB7 292 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ACAP3Q96P50 834 aa8.8□□□□□ -1
SNX13-201ENST00000409076 PGLYRP2Q96PD5 576 aa8.8□□□□□ -1
SNX13-201ENST00000409076 GPR88Q9GZN0 384 aa8.8□□□□□ -1
SNX13-201ENST00000409076 MIS12Q9H081 205 aa8.8□□□□□ -1
SNX13-201ENST00000409076 WNT8AQ9H1J5 351 aa8.8□□□□□ -1
SNX13-201ENST00000409076 QTRT2Q9H974 415 aaKnown RBP8.8□□□□□ -1
SNX13-201ENST00000409076 RBAKQ9NYW8 714 aaPredicted RBP8.8□□□□□ -1
SNX13-201ENST00000409076 TMEM59LQ9UK28 342 aa8.8□□□□□ -1
SNX13-201ENST00000409076 STXBP5LQ9Y2K9 1186 aa8.8□□□□□ -1
SNX13-201ENST00000409076 SLC4A7Q9Y6M7 1214 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ALS2Q96Q42 1657 aa8.8□□□□□ -1
SNX13-201ENST00000409076 K7ERI5 159 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ZMPSTE24O75844 475 aa8.8□□□□□ -1
SNX13-201ENST00000409076 TTC4O95801 387 aa8.8□□□□□ -1
SNX13-201ENST00000409076 BGNP21810 368 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ATP5DP30049 168 aa8.8□□□□□ -1
SNX13-201ENST00000409076 PRKCIP41743 596 aa8.8□□□□□ -1
SNX13-201ENST00000409076 RASSF2P50749 326 aa8.8□□□□□ -1
SNX13-201ENST00000409076 HMGCS2P54868 508 aa8.8□□□□□ -1
SNX13-201ENST00000409076 CRADDP78560 199 aa8.8□□□□□ -1
SNX13-201ENST00000409076 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
SNX13-201ENST00000409076 TAF5Q15542 800 aa8.8□□□□□ -1
SNX13-201ENST00000409076 DARS2Q6PI48 645 aaKnown RBP8.8□□□□□ -1
SNX13-201ENST00000409076 COL23A1Q86Y22 540 aaPredicted RBP8.8□□□□□ -1
SNX13-201ENST00000409076 CD302Q8IX05 232 aa8.8□□□□□ -1
SNX13-201ENST00000409076 TTLL6Q8N841 843 aa8.8□□□□□ -1
SNX13-201ENST00000409076 RBBP8NLQ8NC74 664 aaPredicted RBP8.8□□□□□ -1
SNX13-201ENST00000409076 MIEF2Q96C03 454 aa8.8□□□□□ -1
SNX13-201ENST00000409076 GLT8D2Q9H1C3 349 aa8.8□□□□□ -1
SNX13-201ENST00000409076 EPB41L4BQ9H329 900 aa8.8□□□□□ -1
SNX13-201ENST00000409076 SLC17A7Q9P2U7 560 aa8.8□□□□□ -1
SNX13-201ENST00000409076 MCM8Q9UJA3 840 aa8.8□□□□□ -1
SNX13-201ENST00000409076 COL18A1P39060 1754 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
SNX13-201ENST00000409076 CNTNAP4Q9C0A0 1308 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ITGB4P16144 1822 aa8.8□□□□□ -1
SNX13-201ENST00000409076 H3BRJ5 948 aa8.8□□□□□ -1
SNX13-201ENST00000409076 GYG2O15488 501 aa8.8□□□□□ -1
SNX13-201ENST00000409076 CST8O60676 142 aa8.8□□□□□ -1
SNX13-201ENST00000409076 PSMD10O75832 226 aa8.8□□□□□ -1
SNX13-201ENST00000409076 MT-ND3P03897 115 aa8.8□□□□□ -1
SNX13-201ENST00000409076 WNT7BP56706 349 aa8.8□□□□□ -1
SNX13-201ENST00000409076 IFRD2Q12894 506 aaPredicted RBP8.8□□□□□ -1
SNX13-201ENST00000409076 ANKRD20A2Q5SQ80 823 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ANKRD20A1Q5TYW2 823 aa8.8□□□□□ -1
SNX13-201ENST00000409076 VSTM1Q6UX27 236 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ANKRD35Q8N283 1001 aa8.8□□□□□ -1
SNX13-201ENST00000409076 MSL3Q8N5Y2 521 aaKnown RBP8.8□□□□□ -1
SNX13-201ENST00000409076 KCTD6Q8NC69 237 aa8.8□□□□□ -1
SNX13-201ENST00000409076 CCDC110Q8TBZ0 833 aa8.8□□□□□ -1
SNX13-201ENST00000409076 MXRA8Q9BRK3 442 aa8.8□□□□□ -1
SNX13-201ENST00000409076 MTMR12Q9C0I1 747 aa8.8□□□□□ -1
SNX13-201ENST00000409076 ADAM7Q9H2U9 754 aa8.8□□□□□ -1
SNX13-201ENST00000409076 TMEM206Q9H813 350 aa8.8□□□□□ -1
SNX13-201ENST00000409076 HEY2Q9UBP5 337 aa8.8□□□□□ -1
SNX13-201ENST00000409076 FBXO40Q9UH90 709 aa8.8□□□□□ -1
SNX13-201ENST00000409076 AP1G2O75843 785 aa8.79□□□□□ -1
SNX13-201ENST00000409076 STAM2O75886 525 aa8.79□□□□□ -1
SNX13-201ENST00000409076 USP1O94782 785 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ETS2P15036 469 aa8.79□□□□□ -1
SNX13-201ENST00000409076 MSX2P35548 267 aaPredicted RBP8.79□□□□□ -1
SNX13-201ENST00000409076 TNFSF9P41273 254 aa8.79□□□□□ -1
SNX13-201ENST00000409076 MMP13P45452 471 aa8.79□□□□□ -1
SNX13-201ENST00000409076 MMRN1Q13201 1228 aa8.79□□□□□ -1
SNX13-201ENST00000409076 SPARCL1Q14515 664 aa8.79□□□□□ -1
SNX13-201ENST00000409076 RCN1Q15293 331 aa8.79□□□□□ -1
SNX13-201ENST00000409076 TKFCQ3LXA3 575 aa8.79□□□□□ -1
SNX13-201ENST00000409076 TMEM154Q6P9G4 183 aa8.79□□□□□ -1
SNX13-201ENST00000409076 C6orf89Q6UWU4 347 aa8.79□□□□□ -1
SNX13-201ENST00000409076 CES3Q6UWW8 571 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ANKS1BQ7Z6G8 1248 aa8.79□□□□□ -1
SNX13-201ENST00000409076 CEP120Q8N960 986 aa8.79□□□□□ -1
SNX13-201ENST00000409076 OR5B17Q8NGF7 314 aa8.79□□□□□ -1
SNX13-201ENST00000409076 RFWD2Q8NHY2 731 aa8.79□□□□□ -1
SNX13-201ENST00000409076 PARD3BQ8TEW8 1205 aa8.79□□□□□ -1
SNX13-201ENST00000409076 RNF146Q9NTX7 359 aa8.79□□□□□ -1
SNX13-201ENST00000409076 NYAP2Q9P242 653 aa8.79□□□□□ -1
SNX13-201ENST00000409076 TBX20Q9UMR3 447 aa8.79□□□□□ -1
SNX13-201ENST00000409076 PARP4Q9UKK3 1724 aaKnown RBP8.79□□□□□ -1
SNX13-201ENST00000409076 DNAH12Q6ZR08 3092 aa8.79□□□□□ -1
SNX13-201ENST00000409076 FAM47DPA6NHR8 397 aa8.79□□□□□ -1
SNX13-201ENST00000409076 OPHN1O60890 802 aa8.79□□□□□ -1
SNX13-201ENST00000409076 SNHG28P0DPA3 235 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ESRRAP11474 423 aaPredicted RBP8.79□□□□□ -1
SNX13-201ENST00000409076 TNFRSF8P28908 595 aa8.79□□□□□ -1
SNX13-201ENST00000409076 TMPRSS15P98073 1019 aa8.79□□□□□ -1
SNX13-201ENST00000409076 TMEM62Q0P6H9 643 aa8.79□□□□□ -1
SNX13-201ENST00000409076 CCDC62Q6P9F0 684 aa8.79□□□□□ -1
SNX13-201ENST00000409076 KDELC2Q7Z4H8 507 aa8.79□□□□□ -1
SNX13-201ENST00000409076 SP8Q8IXZ3 490 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ATL2Q8NHH9 583 aa8.79□□□□□ -1
SNX13-201ENST00000409076 DCLK3Q9C098 648 aa8.79□□□□□ -1
SNX13-201ENST00000409076 AGO2Q9UKV8 859 aaKnown RBP8.79□□□□□ -1
SNX13-201ENST00000409076 EXOC7Q9UPT5 735 aa8.79□□□□□ -1
SNX13-201ENST00000409076 C15orf41Q9Y2V0 281 aa8.79□□□□□ -1
SNX13-201ENST00000409076 ANKRD12Q6UB98 2062 aa8.79□□□□□ -1
SNX13-201ENST00000409076 GLI3P10071 1580 aa8.79□□□□□ -1
SNX13-201ENST00000409076 GAKO14976 1311 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms