RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 NOTUMQ6P988 496 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 ZNF606Q8WXB4 792 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 CYFIP2Q96F07 1278 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 TSPAN18Q96SJ8 248 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 PLVAPQ9BX97 442 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 FUT8Q9BYC5 575 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 FAM49AQ9H0Q0 323 aaPredicted RBP17.28■□□□□ 0.36
PARVB-204ENST00000406477 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
PARVB-204ENST00000406477 KRIT1O00522 736 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 SPOPO43791 374 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 CSDE1O75534 798 aaKnown RBP17.28■□□□□ 0.36
PARVB-204ENST00000406477 CALB1P05937 261 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 PAEPP09466 180 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 DARSP14868 501 aaKnown RBP17.28■□□□□ 0.36
PARVB-204ENST00000406477 COMTP21964 271 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 ASPAP45381 313 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 YARSP54577 528 aaKnown RBP17.28■□□□□ 0.36
PARVB-204ENST00000406477 RBP5P82980 135 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 KIZQ2M2Z5 673 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 MON1BQ7L1V2 547 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 TMEM192Q8IY95 271 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 C1orf127Q8N9H9 656 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 TMEM35BQ8NCS4 154 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 SMC1BQ8NDV3 1235 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 CPA5Q8WXQ8 436 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 ZSWIM1Q9BR11 485 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 BCO2Q9BYV7 579 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 SPC25Q9HBM1 224 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 ADAM22Q9P0K1 906 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 PCDHGC3Q9UN70 934 aa17.28■□□□□ 0.36
PARVB-204ENST00000406477 TMEM110-MUSTN1A8MSY1 372 aa17.27■□□□□ 0.35
PARVB-204ENST00000406477 MAP2K7O14733 419 aa17.27■□□□□ 0.35
PARVB-204ENST00000406477 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.35
PARVB-204ENST00000406477 SEL1L2Q5TEA6 688 aa17.27■□□□□ 0.35
PARVB-204ENST00000406477 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.35
PARVB-204ENST00000406477 CCDC26Q8TAB7 109 aa17.27■□□□□ 0.35
PARVB-204ENST00000406477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.27■□□□□ 0.351e-6■■■■■ 39.7
PARVB-204ENST00000406477 KRT12Q99456 494 aa17.27■□□□□ 0.35
PARVB-204ENST00000406477 SIX4Q9UIU6 781 aa17.27■□□□□ 0.35
PARVB-204ENST00000406477 TMEM88BA6NKF7 163 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 MYO1FO00160 1098 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 ATMINO43313 823 aaPredicted RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 ITGB3P05106 788 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 RPLP2P05387 115 aaKnown RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 CD58P19256 250 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 EIF4BP23588 611 aaKnown RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 CTNNA1P35221 906 aaKnown RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 RNASE9P60153 205 aaKnown RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 LACTBP83111 547 aaPredicted RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 PTPROQ16827 1216 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 TAF2Q6P1X5 1199 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 MAATS1Q7Z4T9 603 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 C7orf31Q8N865 590 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 EIF1ADQ8N9N8 165 aaKnown RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 RNPC3Q96LT9 517 aaKnown RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 VIPAS39Q9H9C1 493 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 NXF1Q9UBU9 619 aaKnown RBP17.26■□□□□ 0.35
PARVB-204ENST00000406477 ANAPC7Q9UJX3 599 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 PCDHA3Q9Y5H8 950 aa17.26■□□□□ 0.35
PARVB-204ENST00000406477 DOCK3Q8IZD9 2030 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 ANK1P16157 1881 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 NPTXRO95502 500 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 RRM1P23921 792 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 CDH5P33151 784 aaPredicted RBP17.25■□□□□ 0.35
PARVB-204ENST00000406477 CRYBB1P53674 252 aaPredicted RBP17.25■□□□□ 0.35
PARVB-204ENST00000406477 GJA9P57773 515 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 PURAQ00577 322 aaKnown RBP17.25■□□□□ 0.35
PARVB-204ENST00000406477 TAP1Q03518 808 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 WDR72Q3MJ13 1102 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 CD101Q93033 1021 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 MTG1Q9BT17 334 aaPredicted RBP17.25■□□□□ 0.35
PARVB-204ENST00000406477 PARVAQ9NVD7 372 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 DPP3Q9NY33 737 aa17.25■□□□□ 0.35
PARVB-204ENST00000406477 DMGDHQ9UI17 866 aaKnown RBP17.25■□□□□ 0.35
PARVB-204ENST00000406477 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.25■□□□□ 0.35
PARVB-204ENST00000406477 CALCAP01258 141 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 FGGP02679 453 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 WEE2P0C1S8 567 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
PARVB-204ENST00000406477 HOXC8P31273 242 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 PSMC4P43686 418 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 EPHB4P54760 987 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 RWDD2BP57060 319 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 BEX3Q00994 111 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 MYO1EQ12965 1108 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 PLEKHA7Q6IQ23 1121 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 EMBQ6PCB8 327 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 RUFY4Q6ZNE9 571 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.24■□□□□ 0.35
PARVB-204ENST00000406477 DNAJB3Q8WWF6 145 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 KIF12Q96FN5 646 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 HPDLQ96IR7 371 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 RUNDC3BQ96NL0 473 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 OSMRQ99650 979 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 C11orf70Q9BRQ4 267 aa17.24■□□□□ 0.35
PARVB-204ENST00000406477 TRIM6Q9C030 488 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms