RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ST3GAL5Q9UNP4 418 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 PJA2O43164 708 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 PFKMP08237 780 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 KRT5P13647 590 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 TNFAIP3P21580 790 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 PDE6CP51160 858 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 MYL6P60660 151 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 YWHAEP62258 255 aaKnown RBP22.51■■□□□ 1.19
TPM1-208ENST00000404484 NAB2Q15742 525 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 UBXN11Q5T124 520 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 KIF12Q96FN5 646 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 NUB1Q9Y5A7 615 aa22.51■■□□□ 1.19
TPM1-208ENST00000404484 MEFVO15553 781 aaPredicted RBP22.5■■□□□ 1.19
TPM1-208ENST00000404484 XPOTO43592 962 aaKnown RBP22.5■■□□□ 1.19
TPM1-208ENST00000404484 RECQL4O94761 1208 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 CST3P01034 146 aaPredicted RBP22.5■■□□□ 1.19
TPM1-208ENST00000404484 SPOPLQ6IQ16 392 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 ALKBH5Q6P6C2 394 aaKnown RBP22.5■■□□□ 1.19
TPM1-208ENST00000404484 SYT10Q6XYQ8 523 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 C1orf127Q8N9H9 656 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 ZNF592Q92610 1267 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 AGPAT1Q99943 283 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 SYT11Q9BT88 431 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 NXF3Q9H4D5 531 aaKnown RBP22.5■■□□□ 1.19
TPM1-208ENST00000404484 CNTN3Q9P232 1028 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 NAGPAQ9UK23 515 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 CYP26A1O43174 497 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 PARNO95453 639 aaKnown RBP22.5■■□□□ 1.19
TPM1-208ENST00000404484 CXCL10P02778 98 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 KRT19P08727 400 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 P4HA1P13674 534 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 RBP5P82980 135 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 NFX1Q12986 1120 aaKnown RBP22.5■■□□□ 1.19
TPM1-208ENST00000404484 PAK2Q13177 524 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 FBXO47Q5MNV8 452 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 OSBPL7Q9BZF2 842 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 VRTNQ9H8Y1 702 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 DNAI1Q9UI46 699 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 INTUQ9ULD6 942 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 GUCA1BQ9UMX6 200 aa22.5■■□□□ 1.19
TPM1-208ENST00000404484 ZSCAN20P17040 1043 aaPredicted RBP22.49■■□□□ 1.19
TPM1-208ENST00000404484 FAM109BQ6ICB4 259 aaPredicted RBP22.49■■□□□ 1.19
TPM1-208ENST00000404484 ZNF677Q86XU0 584 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 BEST2Q8NFU1 509 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 EPS8L1Q8TE68 723 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 XYLT2Q9H1B5 865 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 ERVK-5Q9HDB9 667 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 DPP3Q9NY33 737 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 SIX4Q9UIU6 781 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 IPPQ9Y573 584 aa22.49■■□□□ 1.19
TPM1-208ENST00000404484 A0A0U1RQJ8 604 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 DDX3XO00571 662 aaKnown RBP eCLIP22.48■■□□□ 1.192e-8■■■■□ 19.9
TPM1-208ENST00000404484 STAU1O95793 577 aaKnown RBP22.48■■□□□ 1.19
TPM1-208ENST00000404484 ITGB3P05106 788 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 ZNF667Q5HYK9 610 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 ALKAL1Q6UXT8 129 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 GLYCTKQ8IVS8 523 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 SLC30A5Q8TAD4 765 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 ATRIPQ8WXE1 791 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 LACRTQ9GZZ8 138 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 FAM124BQ9H5Z6 455 aaPredicted RBP22.48■■□□□ 1.19
TPM1-208ENST00000404484 NENFQ9UMX5 172 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 CNTN6Q9UQ52 1028 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 PCDHB4Q9Y5E5 795 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 PCDHB2Q9Y5E7 798 aa22.48■■□□□ 1.19
TPM1-208ENST00000404484 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.48■■□□□ 1.19
TPM1-208ENST00000404484 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.47■■□□□ 1.19
TPM1-208ENST00000404484 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.47■■□□□ 1.19
TPM1-208ENST00000404484 RCCD1A6NED2 376 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 CYP11B1P15538 503 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 ACO1P21399 889 aaKnown RBP22.47■■□□□ 1.19
TPM1-208ENST00000404484 CASQ1P31415 396 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 RAB27AP51159 221 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 TCTN1Q2MV58 587 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 LNX1Q8TBB1 728 aaPredicted RBP22.47■■□□□ 1.19
TPM1-208ENST00000404484 SECISBP2LQ93073 1101 aaKnown RBP22.47■■□□□ 1.19
TPM1-208ENST00000404484 ARID3AQ99856 593 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 APOL6Q9BWW8 343 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 PARP2Q9UGN5 583 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 NOCTQ9UK39 431 aaKnown RBP22.47■■□□□ 1.19
TPM1-208ENST00000404484 UBQLN1Q9UMX0 589 aaKnown RBP22.47■■□□□ 1.19
TPM1-208ENST00000404484 HES2Q9Y543 173 aa22.47■■□□□ 1.19
TPM1-208ENST00000404484 TANC1Q9C0D5 1861 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 GRXCR1A8MXD5 290 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 H2AFZP0C0S5 128 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 KCNE1P15382 129 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 POLR2BP30876 1174 aaKnown RBP22.46■■□□□ 1.19
TPM1-208ENST00000404484 SMAD3P84022 425 aaKnown RBP22.46■■□□□ 1.19
TPM1-208ENST00000404484 CDR2Q01850 454 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 XKR4Q5GH76 650 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 ZNF569Q5MCW4 686 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 H2AFVQ71UI9 128 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 SLC47A2Q86VL8 602 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 RNF10Q8N5U6 811 aaKnown RBP22.46■■□□□ 1.19
TPM1-208ENST00000404484 ELMO3Q96BJ8 720 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 MTIF3Q9H2K0 278 aaKnown RBP22.46■■□□□ 1.19
TPM1-208ENST00000404484 FAM105AQ9NUU6 356 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 SEPT11Q9NVA2 429 aaKnown RBP22.46■■□□□ 1.19
TPM1-208ENST00000404484 PADI3Q9ULW8 664 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 ZBBXA8MT70 800 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms