RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CD101Q93033 1021 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 ZNF668Q96K58 619 aaPredicted RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 RNPEPL1Q9HAU8 725 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 LUC7L3O95232 432 aaKnown RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 CYP1A2P05177 515 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 ZCCHC18P0CG32 403 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 TROVE2P10155 538 aaKnown RBP eCLIP9.7□□□□□ -0.86
HPS4-203ENST00000402105 ATP4AP20648 1035 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 CALB2P22676 271 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 CIITAP33076 1130 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 MTMR1Q13613 665 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 KHDC1Q4VXA5 237 aaKnown RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 RNF220Q5VTB9 566 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 AP1ARQ63HQ0 302 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 SCARA5Q6ZMJ2 495 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 RHOT1Q8IXI2 618 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 RFWD2Q8NHY2 731 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 UCMAQ8WVF2 138 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 PRMT6Q96LA8 375 aaPredicted RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 PIDD1Q9HB75 910 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 RAVER2Q9HCJ3 691 aaKnown RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 PCSK1NQ9UHG2 260 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 GRID1Q9ULK0 1009 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 MRPL11Q9Y3B7 192 aaKnown RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 UTRNP46939 3433 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 DCTN3O75935 186 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 GNAT1P11488 350 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 CLEC16AQ2KHT3 1053 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 C3orf62Q6ZUJ4 267 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 OTOAQ7RTW8 1153 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 STK32AQ8WU08 396 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 CRYGNQ8WXF5 182 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 MAK16Q9BXY0 300 aaKnown RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 IQCGQ9H095 443 aaKnown RBP9.7□□□□□ -0.86
HPS4-203ENST00000402105 CCDC134Q9H6E4 229 aa9.7□□□□□ -0.86
HPS4-203ENST00000402105 MROH7Q68CQ1 1323 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 F5H423 210 aaPredicted RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 PIK3R2O00459 728 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 TP73O15350 636 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 SMNDC1O75940 238 aaKnown RBP eCLIP9.69□□□□□ -0.86
HPS4-203ENST00000402105 KRT36O76013 467 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 OAS1P00973 400 aaKnown RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 ADSSP30520 456 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 PPP2R5CQ13362 524 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 MTMR2Q13614 643 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 PTK6Q13882 451 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 DSTYKQ6XUX3 929 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 CDAN1Q8IWY9 1227 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 MAIP1Q8WWC4 291 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 SHC3Q92529 594 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 MCEEQ96PE7 176 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 TTC1Q99614 292 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 TMEM109Q9BVC6 243 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 TMOD2Q9NZR1 351 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 CAPN9O14815 690 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 ESRRAP11474 423 aaPredicted RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 IVDP26440 423 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 GNA15P30679 374 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 LIG4P49917 911 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 YWHAGP61981 247 aaKnown RBP eCLIP9.69□□□□□ -0.86
HPS4-203ENST00000402105 KDSRQ06136 332 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 KPNB1Q14974 876 aaKnown RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 CYP4A22Q5TCH4 519 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 MFSD7Q6UXD7 560 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 SLC25A41Q8N5S1 370 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 MAB21L3Q8N8X9 362 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 CFAP61Q8NHU2 1237 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 HELQQ8TDG4 1101 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 ZNF75CPQ92670 426 aaPredicted RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 PRR11Q96HE9 360 aaPredicted RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 SLC13A1Q9BZW2 595 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 SLC17A7Q9P2U7 560 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 F8VP50 259 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 ATP9AO75110 1047 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 PEX11AO75192 247 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 RFX1P22670 979 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 NPTX2P47972 431 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 NFX1Q12986 1120 aaKnown RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 MKRN3Q13064 507 aaKnown RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 MAPK6Q16659 721 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 CYP1B1Q16678 543 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 AOC3Q16853 763 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 TRABD2AQ86V40 505 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 TCP10LQ8TDR4 215 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 ZNF483Q8TF39 744 aaPredicted RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 TEKT4Q8WW24 435 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 FAM161BQ96MY7 647 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 RILPQ96NA2 401 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 SHCBP1LQ9BZQ2 653 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 CYP39A1Q9NYL5 469 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 CPSF2Q9P2I0 782 aaKnown RBP9.69□□□□□ -0.86
HPS4-203ENST00000402105 TBX20Q9UMR3 447 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 EXOC7Q9UPT5 735 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 CHMP2BQ9UQN3 213 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 IVNS1ABPQ9Y6Y0 642 aa9.69□□□□□ -0.86
HPS4-203ENST00000402105 DDX60LQ5H9U9 1706 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms