RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 LSM8O95777 96 aaKnown RBP13.08□□□□□ -0.32
CLIP4-203ENST00000401617 ITGA4P13612 1032 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 HOXA11P31270 313 aaPredicted RBP13.08□□□□□ -0.32
CLIP4-203ENST00000401617 ATICP31939 592 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 CDH5P33151 784 aaPredicted RBP13.08□□□□□ -0.32
CLIP4-203ENST00000401617 GRM5P41594 1212 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 MARCKSL1P49006 195 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 YWHAEP62258 255 aaKnown RBP13.08□□□□□ -0.32
CLIP4-203ENST00000401617 SMC1AQ14683 1233 aaKnown RBP13.08□□□□□ -0.32
CLIP4-203ENST00000401617 MFSD10Q14728 455 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 BTBD6Q96KE9 485 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 AP1M1Q9BXS5 423 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
CLIP4-203ENST00000401617 TMEM110-MUSTN1A8MSY1 372 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 ERLIN2O94905 339 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CYP2B6P20813 491 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 HOXC8P31273 242 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 PSEN2P49810 448 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CPT1AP50416 773 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 HIC1Q14526 733 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 PPP2R5EQ16537 467 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 DCAF4L1Q3SXM0 396 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 LIN9Q5TKA1 542 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CPNE8Q86YQ8 564 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CAVIN3Q969G5 261 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 GCOM2Q9BZD3 368 aaPredicted RBP13.07□□□□□ -0.32
CLIP4-203ENST00000401617 ZNF518BQ9C0D4 1074 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 C2CD2Q9Y426 696 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 WEE2P0C1S8 567 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 HSPA6P17066 643 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 MMP8P22894 467 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CTGFP29279 349 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 SLC1A1P43005 524 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 TM4SF4P48230 202 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 EPHB4P54760 987 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 IRX5P78411 483 aaPredicted RBP13.07□□□□□ -0.32
CLIP4-203ENST00000401617 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 EMBQ6PCB8 327 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CD302Q8IX05 232 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 KLHL7Q8IXQ5 586 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 GSPT2Q8IYD1 628 aaKnown RBP13.07□□□□□ -0.32
CLIP4-203ENST00000401617 LENG1Q96BZ8 264 aaPredicted RBP13.07□□□□□ -0.32
CLIP4-203ENST00000401617 ACAP3Q96P50 834 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 HINFPQ9BQA5 517 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 ADPGKQ9BRR6 497 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CDHR5Q9HBB8 845 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 EPB41L5Q9HCM4 733 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 ADAM22Q9P0K1 906 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 ANAPC7Q9UJX3 599 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 POLIQ9UNA4 740 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 NR2E1Q9Y466 385 aa13.07□□□□□ -0.32
CLIP4-203ENST00000401617 CLSTN1O94985 981 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 DARSP14868 501 aaKnown RBP13.06□□□□□ -0.32
CLIP4-203ENST00000401617 CD58P19256 250 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 CARSP49589 748 aaKnown RBP13.06□□□□□ -0.32
CLIP4-203ENST00000401617 SREBF2Q12772 1141 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 CRHR2Q13324 411 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 ZNF211Q13398 564 aaPredicted RBP13.06□□□□□ -0.32
CLIP4-203ENST00000401617 NNTQ13423 1086 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 MAMLD1Q13495 774 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 TMEM132DQ14C87 1099 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 RUFY4Q6ZNE9 571 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 CASKIN2Q8WXE0 1202 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLIP4-203ENST00000401617 TFAP2BQ92481 460 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 SCLT1Q96NL6 688 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 DDX47Q9H0S4 455 aaKnown RBP13.06□□□□□ -0.32
CLIP4-203ENST00000401617 FAM124BQ9H5Z6 455 aaPredicted RBP13.06□□□□□ -0.32
CLIP4-203ENST00000401617 PLEKHA5Q9HAU0 1116 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 CYP3A43Q9HB55 503 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 HPCAL4Q9UM19 191 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 SCN1AP35498 2009 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 SCN10AQ9Y5Y9 1956 aa13.06□□□□□ -0.32
CLIP4-203ENST00000401617 TCRBV5S1A1TA0A578 114 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 ZSCAN5CA6NGD5 496 aaPredicted RBP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 SPOPO43791 374 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 ITGB3P05106 788 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 PAEPP09466 180 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 CYP2C9P11712 490 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 EIF4BP23588 611 aaKnown RBP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 BRD2P25440 801 aaKnown RBP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 AARSP49588 968 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 WDTC1Q8N5D0 677 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 TRIM7Q9C029 511 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 MRPL47Q9HD33 250 aaKnown RBP13.05□□□□□ -0.32
CLIP4-203ENST00000401617 ITGA11Q9UKX5 1188 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 DERAQ9Y315 318 aa13.05□□□□□ -0.32
CLIP4-203ENST00000401617 TNPO2O14787 897 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms