RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 NOVA2Q9UNW9 492 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 SLC2A3P11169 496 aa12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 CYP2C19P33261 490 aa12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 SH3BGRP55822 239 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 SF3B3Q15393 1217 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 PPM1LQ5SGD2 360 aa12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 FBXO16Q8IX29 292 aaPredicted RBP12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 WDR35Q9P2L0 1181 aa12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
CACNA1C-213ENST00000399629 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 SESN2P58004 480 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 ACTR2P61160 394 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 MYPNQ86TC9 1320 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 A0A087WUV0 522 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 PRCPP42785 496 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 UBA3Q8TBC4 463 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 PTPRN2Q92932 1015 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 ADA2Q9NZK5 511 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 DSEQ9UL01 958 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 UBQLN1Q9UMX0 589 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 WDR19Q8NEZ3 1342 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 MCF2P10911 925 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 SGCGQ13326 291 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 TMEM199Q8N511 208 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 HPDLQ96IR7 371 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 HDAC6Q9UBN7 1215 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 RESTQ13127 1097 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 MTFR1Q15390 333 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 ALX1Q15699 326 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 MTHFD1LQ6UB35 978 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 EPM2AIP1Q7L775 607 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 ING2Q9H160 280 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 RASA4BC9J798 803 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 RASA4O43374 803 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 B3GAT3O94766 335 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 SYT2Q8N9I0 419 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 HASPINQ8TF76 798 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 TULP4Q9NRJ4 1543 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 PANX2Q96RD6 677 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 HPS4Q9NQG7 708 aa12.66□□□□□ -0.38
CACNA1C-213ENST00000399629 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 ALOX15P16050 662 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 MMP14P50281 582 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 AMHR2Q16671 573 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 ZBED8Q8IZ13 594 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 BTBD6Q96KE9 485 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 SNX24Q9Y343 169 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 FAM32AQ9Y421 112 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 PNPLA7Q6ZV29 1317 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 GRAP2O75791 330 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 ZNF284Q2VY69 593 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 HIPK4Q8NE63 616 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 KLHL29Q96CT2 875 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 ZCWPW1Q9H0M4 648 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 CYP4F11Q9HBI6 524 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 C1orf167Q5SNV9 1468 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 KRT20P35900 424 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 GLRA4Q5JXX5 417 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 TEDDM1Q5T9Z0 273 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 CPA5Q8WXQ8 436 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 XPO6Q96QU8 1125 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 SENP2Q9HC62 589 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 XPNPEP3Q9NQH7 507 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 NRBP1Q9UHY1 535 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 CCDC188H7C350 402 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 RTN2O75298 545 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 CHRM3P20309 590 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 CDC27P30260 824 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 RFX3P48380 749 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 ZNF211Q13398 564 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 CAMK2GQ13555 558 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 IPMKQ8NFU5 416 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 OSGEPL1Q9H4B0 414 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 KANSL3Q9P2N6 904 aa12.65□□□□□ -0.38
CACNA1C-213ENST00000399629 GAS2O43903 313 aaKnown RBP12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 ITGB3P05106 788 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 MLNP12872 115 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 NCKAP1LP55160 1127 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 P3H1Q32P28 736 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 FBXW10Q5XX13 1052 aa12.65□□□□□ -0.39
CACNA1C-213ENST00000399629 RD3Q7Z3Z2 195 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms